Strain Fitness in Agrobacterium fabrum C58 around Atu2531

Experiment: pinene 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	pinene 5 mM
2,503,638	-		Atu2530	0.36	-0.4
2,503,676	-		Atu2530	0.39	+0.2
2,503,725	-		Atu2530	0.43	+0.8
2,503,771	+		Atu2530	0.47	-0.0
2,503,771	+		Atu2530	0.47	+1.1
2,503,771	+		Atu2530	0.47	+0.9
2,503,771	+		Atu2530	0.47	+0.6
2,503,779	-		Atu2530	0.48	-0.3
2,503,804	+		Atu2530	0.50	+0.8
2,503,819	+		Atu2530	0.51	-0.2
2,503,850	+		Atu2530	0.53	-0.3
2,503,896	-		Atu2530	0.57	+0.8
2,504,056	-		Atu2530	0.70	+0.9
2,504,081	+		Atu2530	0.72	-0.1
2,504,129	+		Atu2530	0.76	+0.3
2,504,142	-		Atu2530	0.77	-0.1
2,504,165	-		Atu2530	0.79	+0.2
2,504,191	-		Atu2530	0.81	-0.3
2,504,236	+		Atu2530	0.85	-0.4
2,504,244	-		Atu2530	0.86	-0.0
2,504,245	-		Atu2530	0.86	-1.4
2,504,277	+		Atu2530	0.88	-0.9
2,504,306	+				-1.2
2,504,316	+				-0.1
2,504,335	-				+0.7
2,504,383	+				-0.4
2,504,400	+				-0.3
2,504,416	-				+1.1
2,504,426	+				+0.4
2,504,445	-				+0.0
2,504,495	-				+0.0
2,504,561	-		Atu2531	0.19	-0.1
2,504,606	+		Atu2531	0.27	+1.1
2,504,659	+		Atu2531	0.37	+0.4
2,504,683	+		Atu2531	0.41	+0.4
2,504,724	+		Atu2531	0.49	-0.4
2,504,732	-		Atu2531	0.51	+0.8
2,504,788	+		Atu2531	0.61	-0.0
2,504,807	+		Atu2531	0.64	+1.3
2,504,815	-		Atu2531	0.66	-0.0
2,504,996	+				+1.0
2,505,004	-				+0.1
2,505,148	+				+0.1
2,505,149	-				+0.0
2,505,161	+				-0.2
2,505,281	+		Atu2532	0.18	+0.3
2,505,297	+		Atu2532	0.22	-0.3
2,505,307	+		Atu2532	0.24	+0.1
2,505,367	+		Atu2532	0.38	+0.4
2,505,517	+		Atu2532	0.73	-0.3
2,505,561	+		Atu2532	0.83	+0.1
2,505,561	+		Atu2532	0.83	-0.0
2,505,675	-				+0.5
2,505,690	+				-1.3
2,505,698	-				+0.1
2,505,698	-				-0.1
2,505,754	+		Atu2533	0.10	-0.0
2,505,754	+		Atu2533	0.10	+0.2
2,505,762	-		Atu2533	0.12	-0.3
2,505,762	-		Atu2533	0.12	-0.1
2,505,880	+		Atu2533	0.38	+0.0
2,505,880	+		Atu2533	0.38	+0.1
2,505,880	+		Atu2533	0.38	-0.4
2,505,888	-		Atu2533	0.40	+0.2
2,505,888	-		Atu2533	0.40	-0.6
2,505,888	-		Atu2533	0.40	-0.4