Strain Fitness in Agrobacterium fabrum C58 around Atu2489

Experiment: pinene 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	pinene 5 mM
2,456,965	+		Atu2487	0.85	-0.7
2,457,018	+				-0.4
2,457,032	+				-0.2
2,457,037	+				-0.2
2,457,037	+				+0.4
2,457,045	-				-0.2
2,457,180	+				-0.1
2,457,936	+				-0.4
2,457,954	-				+0.2
2,458,107	+		Atu2489	0.19	+1.1
2,458,197	-		Atu2489	0.30	-1.2
2,458,218	-		Atu2489	0.33	+0.5
2,458,225	-		Atu2489	0.34	-0.8
2,458,294	-		Atu2489	0.42	+0.6
2,458,456	-		Atu2489	0.62	+0.9
2,458,466	+		Atu2489	0.63	+0.5
2,458,494	-		Atu2489	0.67	+0.6
2,458,494	-		Atu2489	0.67	+0.9
2,458,494	-		Atu2489	0.67	+1.0
2,458,535	-		Atu2489	0.72	+0.7
2,458,581	+		Atu2489	0.77	+1.0
2,458,605	+		Atu2489	0.80	+0.9
2,458,718	+				+1.2
2,458,746	-				+1.2
2,458,814	+				+0.0
2,458,822	-				+0.1
2,458,929	+				-0.8
2,458,937	-				+0.2
2,458,937	-				+0.5
2,458,955	-				+2.1
2,459,006	-				+0.2