Strain Fitness in Agrobacterium fabrum C58 around Atu2484

Experiment: pinene 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	pinene 5 mM
2,452,459	+		Atu2483	0.79	-0.4
2,452,472	+		Atu2483	0.79	+1.7
2,452,475	-		Atu2483	0.79	+2.9
2,452,547	-		Atu2483	0.82	-0.1
2,452,589	+		Atu2483	0.83	-0.3
2,452,643	+		Atu2483	0.85	+0.2
2,452,644	-		Atu2483	0.85	-0.0
2,452,914	-				-0.1
2,452,981	+				-0.1
2,453,421	+				-0.3
2,453,487	+		Atu2484	0.31	+0.2
2,453,598	+		Atu2484	0.88	+1.4
2,453,605	+				-0.0
2,453,605	+				+0.3
2,453,676	-				-0.1
2,453,702	+				-0.2
2,453,827	+		Atu2485	0.20	-0.5
2,453,952	+		Atu2485	0.35	-0.3
2,454,045	-		Atu2485	0.46	-0.5
2,454,061	+		Atu2485	0.48	+0.1
2,454,061	+		Atu2485	0.48	+0.3
2,454,069	-		Atu2485	0.49	+0.2
2,454,108	+		Atu2485	0.54	+0.5
2,454,108	+		Atu2485	0.54	-1.4
2,454,116	-		Atu2485	0.55	-0.3
2,454,153	-		Atu2485	0.59	-0.3
2,454,159	-		Atu2485	0.60	-0.1
2,454,207	-		Atu2485	0.65	+0.2
2,454,217	-		Atu2485	0.67	+0.3
2,454,224	-		Atu2485	0.67	-0.8
2,454,224	-		Atu2485	0.67	-0.0
2,454,226	+		Atu2485	0.68	-1.1
2,454,293	+		Atu2485	0.76	+0.1
2,454,435	+				-0.1
2,454,523	+				+0.5