Strain Fitness in Agrobacterium fabrum C58 around Atu2299

Experiment: pinene 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	pinene 5 mM
2,273,260	+				-0.5
2,273,311	-				+0.2
2,273,321	+				-0.1
2,273,337	-				-0.1
2,273,358	+				-0.1
2,273,424	-				-1.0
2,273,465	-				+0.1
2,273,465	-				-1.0
2,273,592	+		Atu2298	0.34	-0.0
2,273,594	+		Atu2298	0.34	-0.5
2,273,604	+		Atu2298	0.36	-0.6
2,273,611	+		Atu2298	0.38	-0.2
2,273,612	-		Atu2298	0.38	+0.5
2,273,612	-		Atu2298	0.38	+0.3
2,273,619	-		Atu2298	0.39	+0.6
2,273,635	+		Atu2298	0.42	+0.3
2,273,639	-		Atu2298	0.43	-0.0
2,273,693	+		Atu2298	0.54	+0.2
2,273,723	+		Atu2298	0.59	+1.7
2,273,763	+		Atu2298	0.67	-1.1
2,273,839	-		Atu2298	0.82	-1.0
2,273,839	-		Atu2298	0.82	-1.1
2,273,874	+		Atu2298	0.89	-0.1
2,274,027	+				-0.5
2,274,037	+				+0.2
2,274,037	+				+0.1
2,274,045	-				+0.1
2,274,438	+		Atu2299	0.47	-0.1
2,274,441	+		Atu2299	0.48	+0.1
2,274,570	-		Atu2299	0.69	-1.2
2,274,602	+		Atu2299	0.74	+0.0
2,274,622	-		Atu2299	0.77	+0.2
2,274,623	+		Atu2299	0.78	+0.3
2,274,623	-		Atu2299	0.78	-0.4
2,274,763	+				-0.1
2,274,845	+				-0.8
2,274,860	+				+0.1
2,274,871	+				-0.4