Strain Fitness in Agrobacterium fabrum C58 around Atu2174

Experiment: pinene 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	pinene 5 mM
2,146,743	-		Atu2173	0.74	+0.2
2,146,758	+		Atu2173	0.75	-0.7
2,146,940	+		Atu2173	0.84	-0.5
2,146,945	+		Atu2173	0.84	-0.1
2,147,030	+		Atu2173	0.88	+0.1
2,147,148	-				+0.3
2,147,155	+				-0.3
2,147,177	+				-0.0
2,147,225	-				-1.0
2,147,235	-				-0.1
2,147,235	-				+0.2
2,147,284	-				-0.0
2,147,291	-				+0.3
2,147,305	+				+0.6
2,147,354	+				+0.0
2,147,360	+				-0.3
2,147,360	+				+0.1
2,147,362	-				-0.2
2,147,362	-				-0.4
2,147,381	-				+0.5
2,147,415	+				-0.6
2,147,418	-				-0.2
2,147,442	+				+0.1
2,147,442	+				-0.2
2,147,450	-				+0.1
2,147,554	+				+0.5
2,147,580	-				+0.0
2,147,607	-				-0.1
2,147,715	+		Atu2174	0.29	-0.1
2,147,723	-		Atu2174	0.30	-0.3
2,147,733	+		Atu2174	0.33	-0.8
2,147,768	-		Atu2174	0.40	+0.1
2,147,904	-		Atu2174	0.68	-0.1
2,147,906	-		Atu2174	0.69	-0.2
2,147,963	-		Atu2174	0.80	-0.7
2,147,974	+		Atu2174	0.83	-0.9
2,147,988	+		Atu2174	0.86	-0.3
2,148,208	+		Atu2175	0.12	+0.3
2,148,216	-		Atu2175	0.13	+0.3
2,148,256	-		Atu2175	0.17	-0.5
2,148,352	+		Atu2175	0.28	-0.4
2,148,416	-		Atu2175	0.35	-0.1
2,148,437	+		Atu2175	0.37	+0.8
2,148,445	-		Atu2175	0.38	-1.3
2,148,445	-		Atu2175	0.38	+0.0
2,148,459	-		Atu2175	0.39	+0.2
2,148,476	+		Atu2175	0.41	-0.0
2,148,554	-		Atu2175	0.50	-0.6
2,148,826	-		Atu2175	0.79	+0.7
2,148,886	+		Atu2175	0.86	+0.3
2,148,923	+		Atu2175	0.90	+0.3
2,148,950	-				-0.2