Strain Fitness in Agrobacterium fabrum C58 around Atu1844

Experiment: pinene 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	pinene 5 mM
1,824,697	+				+0.4
1,824,697	+				+0.4
1,825,039	+		Atu1843	0.23	-0.2
1,825,418	-		Atu1843	0.73	-0.4
1,825,607	+				-0.7
1,825,708	-		Atu1844	0.11	-0.0
1,825,734	+		Atu1844	0.22	+0.9
1,825,742	-		Atu1844	0.25	-0.2
1,825,850	-		Atu1844	0.70	+0.6
1,826,146	+		Atu1845	0.25	+0.1
1,826,176	-		Atu1845	0.30	+0.6
1,826,347	-		Atu1845	0.57	+0.1
1,826,503	+		Atu1845	0.82	-0.4
1,826,667	-				-0.7
1,826,854	+		Atu1846	0.40	+0.3
1,826,876	+		Atu1846	0.45	+0.2