Strain Fitness in Agrobacterium fabrum C58 around Atu1810

Experiment: pinene 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	pinene 5 mM
1,791,107	+		Atu1808	0.51	-0.4
1,791,107	+		Atu1808	0.51	-0.3
1,791,187	-		Atu1808	0.58	+0.1
1,791,254	-		Atu1808	0.64	+0.5
1,791,269	+		Atu1808	0.65	-0.8
1,791,324	+		Atu1808	0.70	-0.3
1,791,348	+		Atu1808	0.72	-0.2
1,791,451	-		Atu1808	0.81	+0.1
1,791,454	-		Atu1808	0.82	-0.8
1,791,498	-		Atu1808	0.85	-0.0
1,791,549	+				-0.3
1,791,855	+				+0.8
1,791,868	-				-0.2
1,791,930	-				+0.3
1,792,249	+		Atu1810	0.61	+0.6
1,792,259	+		Atu1810	0.64	-0.9
1,792,352	+				-0.3
1,792,352	+				-0.1
1,792,352	+				-0.5
1,792,531	-				+1.0
1,792,666	-				+0.9
1,792,721	-		Atu1812	0.25	-0.2
1,792,771	+		Atu1812	0.48	-0.2
1,792,771	+		Atu1812	0.48	+0.1
1,792,791	+		Atu1812	0.58	-0.4
1,792,799	+		Atu1812	0.62	-0.4
1,792,931	-				-0.1