Strain Fitness in Agrobacterium fabrum C58 around Atu1581

Experiment: pinene 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	pinene 5 mM
1,565,988	+		Atu1580	0.13	-0.3
1,566,012	-		Atu1580	0.16	+0.1
1,566,019	-		Atu1580	0.17	-0.2
1,566,157	-		Atu1580	0.35	-0.2
1,566,281	+		Atu1580	0.51	-0.0
1,566,289	-		Atu1580	0.52	+0.4
1,566,309	+		Atu1580	0.55	+0.4
1,566,348	-		Atu1580	0.60	-0.5
1,566,387	+		Atu1580	0.65	+0.5
1,566,402	-		Atu1580	0.67	+0.2
1,566,453	-		Atu1580	0.73	-0.2
1,566,469	+		Atu1580	0.75	+0.2
1,566,495	-		Atu1580	0.79	-0.0
1,566,502	-		Atu1580	0.80	+0.1
1,566,573	-		Atu1580	0.89	-0.4
1,566,655	-				+0.0
1,566,957	+		Atu1581	0.51	-0.1
1,566,967	-		Atu1581	0.58	-0.7
1,567,000	+		Atu1581	0.79	-0.4
1,567,077	+				-0.1
1,567,231	-				+0.2
1,567,345	-				-0.0
1,567,532	+		Atu1584	0.23	-0.1
1,567,565	+		Atu1584	0.38	-0.9
1,567,571	+		Atu1584	0.41	-0.1
1,567,571	+		Atu1584	0.41	+0.0
1,567,571	+		Atu1584	0.41	-0.3
1,567,596	-		Atu1584	0.52	+0.0
1,567,849	+		Atu1585	0.79	+0.7
1,567,978	+				+0.7
1,567,978	+				+0.4
1,567,986	-				-0.2