Strain Fitness in Agrobacterium fabrum C58 around Atu1559

Experiment: pinene 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	pinene 5 mM
1,545,565	-				+0.1
1,545,572	-				-0.2
1,545,593	-				-0.2
1,545,614	+				+0.3
1,545,622	-				+0.3
1,545,766	-		Atu1558	0.16	-0.4
1,545,780	+		Atu1558	0.18	-0.1
1,545,793	-		Atu1558	0.20	-0.2
1,545,793	-		Atu1558	0.20	+0.0
1,546,092	+		Atu1558	0.53	+0.0
1,546,444	+				+0.0
1,546,481	-				+0.2
1,546,507	-				+1.0
1,546,533	+				+0.5
1,546,533	+				+0.3
1,546,541	-				-0.0
1,546,736	+		Atu1559	0.46	-0.3
1,546,856	+		Atu1559	0.72	-0.6
1,547,078	-				-0.7