Strain Fitness in Agrobacterium fabrum C58 around Atu1484

Experiment: pinene 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	pinene 5 mM
1,474,273	+				+0.2
1,474,273	+				-0.4
1,474,273	+				-0.2
1,474,273	+				+0.0
1,474,281	-				-0.0
1,474,283	+				+0.2
1,474,283	+				-0.4
1,474,293	+				+0.5
1,474,301	-				-0.2
1,474,355	+				-0.1
1,474,363	-				-0.0
1,474,589	+				-0.4
1,474,623	-		Atu1483	0.12	-0.3
1,474,699	-		Atu1483	0.24	+0.7
1,474,861	-		Atu1483	0.49	+0.1
1,474,933	+		Atu1483	0.60	+0.3
1,474,987	+		Atu1483	0.68	-0.3
1,475,107	+		Atu1483	0.87	+0.5
1,475,165	+				+0.0
1,475,211	-				+0.3
1,475,345	-		Atu1484	0.19	+0.2
1,475,442	-		Atu1484	0.32	-0.0
1,475,467	-		Atu1484	0.35	+0.4
1,475,562	-		Atu1484	0.47	+0.5
1,475,587	+		Atu1484	0.50	+0.3
1,475,897	-				+0.1
1,476,021	-		Atu1485	0.10	+0.1
1,476,026	-		Atu1485	0.11	+0.5
1,476,028	+		Atu1485	0.12	+0.5
1,476,039	+		Atu1485	0.14	+0.5
1,476,043	+		Atu1485	0.15	-1.4
1,476,051	-		Atu1485	0.16	-0.4
1,476,054	-		Atu1485	0.17	+0.3
1,476,092	-		Atu1485	0.24	+0.3
1,476,126	-		Atu1485	0.31	-0.2
1,476,126	-		Atu1485	0.31	-0.3
1,476,156	-		Atu1485	0.37	+0.1
1,476,211	+		Atu1485	0.48	+0.0
1,476,425	+				+0.0
1,476,438	+				+0.0
1,476,491	-				-0.8
1,476,528	-		Atu1486	0.12	+0.4
1,476,528	-		Atu1486	0.12	+0.1
1,476,680	+		Atu1486	0.51	+0.3
1,476,721	+		Atu1486	0.62	+0.5
1,476,737	-		Atu1486	0.66	+0.5
1,476,801	+		Atu1486	0.82	-0.3
1,476,820	+		Atu1486	0.87	-0.7
1,476,871	+				-1.0
1,476,879	-				-0.3