Strain Fitness in Agrobacterium fabrum C58 around Atu1457

Experiment: pinene 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	pinene 5 mM
1,452,340	-		Atu1456	0.41	+0.5
1,452,409	-		Atu1456	0.45	+0.2
1,452,602	-		Atu1456	0.57	-0.3
1,452,642	+		Atu1456	0.59	-0.3
1,452,752	-		Atu1456	0.66	+1.1
1,452,780	-		Atu1456	0.68	+1.2
1,452,824	+		Atu1456	0.70	+0.4
1,452,849	+		Atu1456	0.72	+0.6
1,452,849	+		Atu1456	0.72	-0.1
1,452,857	-		Atu1456	0.72	-0.9
1,452,895	+		Atu1456	0.74	-1.2
1,453,032	+		Atu1456	0.83	-0.5
1,453,085	-		Atu1456	0.86	+2.0
1,453,105	-		Atu1456	0.87	-0.1
1,453,125	+		Atu1456	0.88	-0.0
1,453,191	+				+0.2
1,453,219	+				+0.4
1,453,220	-				+0.3
1,453,280	+				+0.3
1,453,288	-				+1.0
1,453,292	+				-0.0
1,453,292	+				+0.0
1,453,404	+		Atu1457	0.14	-1.2
1,453,524	+		Atu1457	0.38	-0.4
1,453,526	-		Atu1457	0.38	-0.1
1,453,546	-		Atu1457	0.42	-0.2
1,453,769	+		Atu1457	0.86	-0.2
1,453,814	-				+0.3
1,453,839	-				+0.2
1,453,958	-				-0.2
1,454,799	+				-1.0