Strain Fitness in Agrobacterium fabrum C58 around Atu1308

Experiment: pinene 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	pinene 5 mM
1,299,452	+		Atu1307	0.35	-0.2
1,299,628	-		Atu1307	0.49	-0.0
1,299,628	-		Atu1307	0.49	+0.3
1,299,891	-		Atu1307	0.69	+0.5
1,300,124	-		Atu1307	0.87	+0.2
1,300,165	-				+1.3
1,300,271	-				+0.5
1,300,286	-				-0.1
1,300,290	-				+0.3
1,300,305	-				+0.0
1,300,305	-				+0.8
1,300,537	-		Atu1308	0.27	-0.6
1,300,539	-		Atu1308	0.27	-0.4
1,300,709	-		Atu1308	0.45	-0.5
1,300,732	-		Atu1308	0.47	+0.2
1,300,745	-		Atu1308	0.49	-1.6
1,300,814	-		Atu1308	0.56	+0.1
1,301,005	+		Atu1308	0.76	-0.3
1,301,288	-				+0.9
1,301,318	+				-0.9
1,301,326	-				-0.4
1,301,328	-				+0.1
1,301,328	-				-0.1
1,301,346	-				+0.2
1,301,358	-				-0.0
1,301,446	-				-0.4
1,301,447	+				+0.2
1,301,447	+				+0.2
1,301,455	-				-0.1
1,301,474	+				-0.3
1,301,497	+				+0.0
1,301,498	+				-0.2
1,301,535	-		Atu8153	0.18	-1.1
1,301,556	+		Atu8153	0.23	-0.4
1,301,614	-		Atu8153	0.36	-0.3
1,301,614	-		Atu8153	0.36	+1.5
1,301,624	+		Atu8153	0.38	-1.0
1,301,723	+		Atu8153	0.61	-0.5
1,301,732	-		Atu8153	0.63	+0.3
1,301,770	-		Atu8153	0.72	+0.4
1,301,797	-		Atu8153	0.78	-0.1
1,301,891	-				-1.8
1,302,200	+				-0.1
1,302,212	+				+0.1