Strain Fitness in Agrobacterium fabrum C58 around Atu1077

Experiment: pinene 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	pinene 5 mM
1,068,362	-				-0.7
1,068,557	-				-0.5
1,068,560	-				-0.1
1,068,725	-		Atu1076	0.18	-0.1
1,068,756	-		Atu1076	0.23	-0.1
1,068,780	+		Atu1076	0.27	+0.1
1,068,787	+		Atu1076	0.28	-0.0
1,068,789	-		Atu1076	0.29	-0.8
1,068,795	-		Atu1076	0.30	-0.2
1,068,795	-		Atu1076	0.30	+0.1
1,068,805	-		Atu1076	0.31	+0.2
1,069,472	+		Atu1077	0.12	-1.4
1,069,497	-		Atu1077	0.14	+0.9
1,069,579	-		Atu1077	0.20	-0.6
1,069,579	-		Atu1077	0.20	-2.2
1,069,579	-		Atu1077	0.20	+0.4
1,069,694	+		Atu1077	0.28	-1.2
1,069,871	+		Atu1077	0.41	+0.3
1,070,022	-		Atu1077	0.51	-0.2
1,070,288	-		Atu1077	0.70	-0.3
1,070,651	+				-0.2
1,070,659	-				+0.0
1,070,688	+				-0.2
1,070,755	-		Atu1078	0.27	+0.4
1,070,832	-		Atu1078	0.73	-0.2
1,070,854	-		Atu1078	0.87	+0.3
1,070,977	+				+0.2
1,071,307	+				+0.6
1,071,449	-				-1.1
1,071,480	-		Atu1080	0.11	+0.5
1,071,530	+		Atu1080	0.15	+0.1
1,071,565	+		Atu1080	0.18	+0.2
1,071,663	-		Atu1080	0.26	+1.5
1,071,685	-		Atu1080	0.28	-1.5