Experiment: pinene 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Atu0468 and Atu0469 are separated by 81 nucleotides Atu0469 and Atu0470 are separated by 149 nucleotides Atu0470 and Atu0471 are separated by 97 nucleotides Atu0471 and Atu0472 are separated by 443 nucleotides
Atu0468: Atu0468 - hypothetical protein, at 459,236 to 459,649
Atu0468
Atu0469: Atu0469 - hypothetical protein, at 459,731 to 460,009
Atu0469
Atu0470: Atu0470 - hypothetical protein, at 460,159 to 460,419
Atu0470
Atu0471: Atu0471 - hypothetical protein, at 460,517 to 460,756
Atu0471
Atu0472: Atu0472 - hypothetical protein, at 461,200 to 461,757
Atu0472
Position (kb) 460
461 Strain fitness (log2 ratio) -1
0
1
2 at 459.164 kb on - strand at 459.164 kb on - strand at 459.164 kb on - strand at 459.175 kb on - strand at 459.185 kb on - strand at 459.185 kb on - strand at 459.185 kb on - strand at 459.193 kb on + strand at 459.201 kb on - strand at 459.201 kb on - strand at 459.203 kb on + strand at 459.203 kb on + strand at 459.226 kb on - strand at 459.238 kb on - strand at 459.270 kb on - strand at 459.296 kb on + strand, within Atu0468 at 459.296 kb on + strand, within Atu0468 at 459.296 kb on + strand, within Atu0468 at 459.296 kb on + strand, within Atu0468 at 459.304 kb on - strand, within Atu0468 at 459.304 kb on - strand, within Atu0468 at 459.304 kb on - strand, within Atu0468 at 459.311 kb on + strand, within Atu0468 at 459.311 kb on + strand, within Atu0468 at 459.357 kb on - strand, within Atu0468 at 459.417 kb on + strand, within Atu0468 at 459.469 kb on - strand, within Atu0468 at 459.484 kb on + strand, within Atu0468 at 459.566 kb on - strand, within Atu0468 at 459.616 kb on + strand at 459.617 kb on + strand at 459.620 kb on - strand at 459.623 kb on + strand at 459.625 kb on + strand at 459.641 kb on - strand at 459.651 kb on - strand at 459.651 kb on - strand at 459.666 kb on - strand at 459.666 kb on - strand at 459.706 kb on + strand at 459.706 kb on + strand at 459.706 kb on + strand at 459.706 kb on + strand at 459.711 kb on + strand at 459.714 kb on - strand at 459.719 kb on - strand at 459.739 kb on - strand at 459.787 kb on - strand, within Atu0469 at 459.787 kb on - strand, within Atu0469 at 459.792 kb on - strand, within Atu0469 at 459.792 kb on - strand, within Atu0469 at 459.808 kb on - strand, within Atu0469 at 459.808 kb on - strand, within Atu0469 at 459.808 kb on - strand, within Atu0469 at 459.808 kb on - strand, within Atu0469 at 459.812 kb on + strand, within Atu0469 at 459.852 kb on - strand, within Atu0469 at 459.868 kb on + strand, within Atu0469 at 459.889 kb on + strand, within Atu0469 at 459.983 kb on + strand at 459.991 kb on - strand at 460.001 kb on - strand at 460.076 kb on + strand at 460.076 kb on + strand at 460.084 kb on - strand at 460.170 kb on - strand at 460.275 kb on + strand, within Atu0470 at 460.524 kb on + strand at 460.532 kb on - strand at 460.691 kb on + strand, within Atu0471 at 460.699 kb on - strand, within Atu0471 at 460.699 kb on - strand, within Atu0471 at 460.724 kb on - strand, within Atu0471 at 460.838 kb on - strand at 460.867 kb on - strand at 460.951 kb on + strand at 460.957 kb on - strand at 461.078 kb on - strand at 461.122 kb on + strand at 461.147 kb on + strand at 461.154 kb on - strand at 461.210 kb on - strand at 461.353 kb on + strand, within Atu0472 at 461.354 kb on + strand, within Atu0472 at 461.409 kb on + strand, within Atu0472 at 461.419 kb on + strand, within Atu0472
Per-strain Table
Position Strand Gene LocusTag Fraction pinene 5 mM remove 459,164 - +0.5 459,164 - -0.6 459,164 - -0.8 459,175 - +0.9 459,185 - +0.5 459,185 - +0.6 459,185 - +0.5 459,193 + -0.1 459,201 - +0.1 459,201 - -0.9 459,203 + -0.2 459,203 + -0.6 459,226 - -0.3 459,238 - +0.4 459,270 - +0.2 459,296 + Atu0468 0.14 -0.6 459,296 + Atu0468 0.14 +0.3 459,296 + Atu0468 0.14 -0.2 459,296 + Atu0468 0.14 +0.4 459,304 - Atu0468 0.16 +0.2 459,304 - Atu0468 0.16 -0.9 459,304 - Atu0468 0.16 +0.2 459,311 + Atu0468 0.18 -0.1 459,311 + Atu0468 0.18 -0.4 459,357 - Atu0468 0.29 +1.3 459,417 + Atu0468 0.44 +0.2 459,469 - Atu0468 0.56 +0.1 459,484 + Atu0468 0.60 -0.7 459,566 - Atu0468 0.80 -0.0 459,616 + +0.5 459,617 + +0.3 459,620 - +0.2 459,623 + +1.0 459,625 + -0.1 459,641 - -1.2 459,651 - -0.1 459,651 - +0.0 459,666 - -0.4 459,666 - +0.1 459,706 + +0.1 459,706 + -0.1 459,706 + +0.1 459,706 + -0.1 459,711 + +0.0 459,714 - -0.1 459,719 - +0.3 459,739 - -0.3 459,787 - Atu0469 0.20 +0.7 459,787 - Atu0469 0.20 -0.8 459,792 - Atu0469 0.22 -0.1 459,792 - Atu0469 0.22 -0.2 459,808 - Atu0469 0.28 +0.3 459,808 - Atu0469 0.28 +0.2 459,808 - Atu0469 0.28 +0.8 459,808 - Atu0469 0.28 +2.3 459,812 + Atu0469 0.29 +0.1 459,852 - Atu0469 0.43 +0.4 459,868 + Atu0469 0.49 +0.5 459,889 + Atu0469 0.57 +0.1 459,983 + -0.1 459,991 - -0.6 460,001 - -0.1 460,076 + +0.4 460,076 + -0.3 460,084 - +0.1 460,170 - +0.1 460,275 + Atu0470 0.44 +0.2 460,524 + -0.2 460,532 - +0.1 460,691 + Atu0471 0.72 -0.3 460,699 - Atu0471 0.76 +0.1 460,699 - Atu0471 0.76 +0.9 460,724 - Atu0471 0.86 +0.0 460,838 - +0.5 460,867 - +0.0 460,951 + +0.2 460,957 - -0.2 461,078 - +0.0 461,122 + -0.3 461,147 + +0.2 461,154 - +0.8 461,210 - -0.4 461,353 + Atu0472 0.27 -0.2 461,354 + Atu0472 0.28 +0.1 461,409 + Atu0472 0.37 +0.3 461,419 + Atu0472 0.39 -0.2
Or see this region's nucleotide sequence