Strain Fitness in Agrobacterium fabrum C58 around Atu3242

Experiment: pinene 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	pinene 5 mM
258,343	-		Atu3241	0.11	+0.2
258,366	-		Atu3241	0.13	-0.5
258,455	-		Atu3241	0.21	+0.4
258,561	-		Atu3241	0.31	+0.6
258,602	+		Atu3241	0.35	+0.1
258,670	-		Atu3241	0.41	+0.1
258,800	-		Atu3241	0.53	+0.1
258,801	+		Atu3241	0.53	-0.3
258,903	+		Atu3241	0.62	-0.1
258,911	-		Atu3241	0.63	+0.1
258,917	-		Atu3241	0.63	-0.1
258,944	-		Atu3241	0.66	-0.3
258,944	-		Atu3241	0.66	+0.3
259,007	+		Atu3241	0.72	+0.3
259,085	+		Atu3241	0.79	+0.1
259,085	+		Atu3241	0.79	+0.2
259,093	-		Atu3241	0.79	+0.0
259,093	-		Atu3241	0.79	-0.4
259,224	+				-0.1
259,224	+				-0.2
259,232	-				-0.4
259,262	+				+0.1
259,270	+				-0.7
259,278	-				+0.3
259,278	-				+0.8
259,349	+				+0.5
259,435	+		Atu3242	0.15	-0.1
259,435	+		Atu3242	0.15	+0.5
259,442	+		Atu3242	0.16	+0.0
259,443	-		Atu3242	0.17	+2.3
259,443	-		Atu3242	0.17	+0.3
259,486	-		Atu3242	0.23	+0.3
259,754	-		Atu3242	0.65	-0.2
259,764	-		Atu3242	0.67	-0.2
259,941	-				-0.1
260,024	-				-0.6
260,078	+				+0.5
260,089	-				-0.0
260,098	-				-0.3
260,193	-		Atu3243	0.13	-0.2
260,355	-		Atu3243	0.25	+0.1
260,456	-		Atu3243	0.32	-0.5
260,483	+		Atu3243	0.34	+0.6
260,491	-		Atu3243	0.35	-0.2
260,708	+		Atu3243	0.51	-0.2
260,718	-		Atu3243	0.51	+0.2
260,762	+		Atu3243	0.54	+1.9
260,770	-		Atu3243	0.55	+3.3
260,771	-		Atu3243	0.55	+0.6
260,918	-		Atu3243	0.66	-0.1
260,951	+		Atu3243	0.68	+0.3
260,959	-		Atu3243	0.69	+0.3