Strain Fitness in Agrobacterium fabrum C58 around Atu4149

Experiment: D(+)-Carvone 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D(+)-Carvone 5 mM
1,265,414	-		Atu4148	0.12	-2.8
1,265,542	+		Atu4148	0.24	-2.3
1,265,546	+		Atu4148	0.25	-3.0
1,265,611	-		Atu4148	0.31	-1.0
1,265,615	+		Atu4148	0.32	-1.3
1,265,734	-		Atu4148	0.43	-2.1
1,265,818	+		Atu4148	0.51	-2.2
1,265,821	-		Atu4148	0.52	+2.2
1,265,821	-		Atu4148	0.52	-1.5
1,265,821	-		Atu4148	0.52	-3.4
1,265,958	+		Atu4148	0.65	-3.0
1,265,958	+		Atu4148	0.65	-1.5
1,266,114	-		Atu4148	0.80	-1.7
1,266,163	+		Atu4148	0.85	-0.9
1,266,317	+				-0.1
1,266,350	-				+0.9
1,266,448	-				-3.4
1,266,526	+				-2.3
1,266,534	-		Atu4149	0.10	-1.8
1,266,622	-		Atu4149	0.17	-1.7
1,266,663	+		Atu4149	0.20	-2.3
1,266,707	-		Atu4149	0.23	-1.6
1,266,758	+		Atu4149	0.27	-2.3
1,266,808	-		Atu4149	0.31	-3.2
1,266,895	+		Atu4149	0.37	-3.0
1,266,895	+		Atu4149	0.37	-3.3
1,266,895	+		Atu4149	0.37	-3.1
1,266,895	+		Atu4149	0.37	-3.7
1,266,910	+		Atu4149	0.38	-1.9
1,266,918	-		Atu4149	0.39	-1.3
1,266,918	-		Atu4149	0.39	-1.9
1,266,918	-		Atu4149	0.39	-1.7
1,266,933	-		Atu4149	0.40	-1.3
1,266,995	-		Atu4149	0.45	-3.1
1,267,020	+		Atu4149	0.47	-4.1
1,267,036	-		Atu4149	0.48	-3.5
1,267,036	-		Atu4149	0.48	-0.5
1,267,118	+		Atu4149	0.54	-2.3
1,267,226	-		Atu4149	0.62	-4.2
1,267,284	-		Atu4149	0.66	-1.2
1,267,334	+		Atu4149	0.70	-2.0
1,267,408	-		Atu4149	0.76	-4.7
1,267,445	-		Atu4149	0.79	-2.4
1,267,471	+		Atu4149	0.80	-3.2
1,267,479	-		Atu4149	0.81	-2.6
1,267,514	-		Atu4149	0.84	-0.7
1,267,549	+		Atu4149	0.86	-1.5
1,267,550	+		Atu4149	0.86	-1.7
1,267,650	+				-2.1
1,267,658	-				-2.2
1,267,992	+				-0.6
1,268,005	-				-0.0
1,268,039	+				-0.3
1,268,047	-				-1.0
1,268,104	-				-0.2
1,268,303	+		Atu4150	0.22	-0.2
1,268,306	-		Atu4150	0.22	+0.2
1,268,311	-		Atu4150	0.22	+0.9
1,268,313	+		Atu4150	0.23	-0.3
1,268,313	+		Atu4150	0.23	-0.2
1,268,321	-		Atu4150	0.24	+0.3
1,268,503	+		Atu4150	0.44	-0.2
1,268,503	+		Atu4150	0.44	-0.2
1,268,536	+		Atu4150	0.48	-0.1
1,268,591	-		Atu4150	0.54	-0.1
1,268,621	+		Atu4150	0.57	-0.2