Strain Fitness in Agrobacterium fabrum C58 around Atu1630

Experiment: D(+)-Carvone 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D(+)-Carvone 5 mM
1,614,189	+		Atu1627	0.81	-0.2
1,614,381	-				+0.7
1,614,523	-		Atu1628	0.49	-0.5
1,614,525	+		Atu1628	0.50	+0.1
1,614,558	-		Atu1628	0.59	-0.6
1,614,559	+		Atu1628	0.59	+1.2
1,614,682	+				+0.1
1,614,727	+				-0.4
1,614,979	-		Atu1629	0.88	+0.6
1,615,116	-				+0.1
1,615,186	+				-0.5
1,615,317	-				-0.5
1,615,441	-		Atu1630	0.17	+0.9
1,615,463	-		Atu1630	0.19	-1.0
1,615,510	+		Atu1630	0.22	-0.9
1,615,552	-		Atu1630	0.24	-0.3
1,615,579	+		Atu1630	0.26	-0.5
1,615,593	+		Atu1630	0.27	+0.7
1,615,637	+		Atu1630	0.30	-0.7
1,615,641	-		Atu1630	0.30	-1.3
1,615,663	-		Atu1630	0.32	-1.9
1,615,706	+		Atu1630	0.34	-1.2
1,615,769	-		Atu1630	0.38	+0.9
1,615,848	-		Atu1630	0.43	-0.3
1,615,871	-		Atu1630	0.45	-0.4
1,615,974	-		Atu1630	0.52	-0.5
1,616,029	+		Atu1630	0.55	-1.0
1,616,039	+		Atu1630	0.56	+0.0
1,616,053	+		Atu1630	0.57	-1.1
1,616,164	-		Atu1630	0.64	-0.2
1,616,250	+		Atu1630	0.69	-0.6
1,616,258	-		Atu1630	0.70	-0.3
1,616,258	-		Atu1630	0.70	-0.6
1,616,330	+		Atu1630	0.74	-1.3
1,616,372	+		Atu1630	0.77	-0.3
1,616,372	+		Atu1630	0.77	-0.2
1,616,372	+		Atu1630	0.77	+0.0
1,616,380	-		Atu1630	0.78	-0.4
1,616,387	+		Atu1630	0.78	+0.3
1,616,448	-		Atu1630	0.82	-0.4
1,616,592	-				-0.8
1,616,846	+		Atu1631	0.14	-0.1
1,616,865	-		Atu1631	0.16	-0.2
1,616,893	-		Atu1631	0.20	+1.4
1,616,904	+		Atu1631	0.22	-0.2
1,617,121	+		Atu1631	0.51	-0.1
1,617,346	-		Atu1631	0.81	-0.1
1,617,416	+		Atu1631	0.90	-0.9
1,617,476	+				-0.4
1,617,496	-				+0.6
1,617,539	-				+0.3
1,617,595	-				-0.7
1,617,665	+				+0.7
1,617,693	-				+0.1