Strain Fitness in Agrobacterium fabrum C58 around Atu1160

Experiment: D(+)-Carvone 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D(+)-Carvone 5 mM
1,154,135	-				+0.6
1,154,227	+				-0.2
1,154,271	-		Atu1159	0.11	-0.4
1,154,281	+		Atu1159	0.12	+0.8
1,154,350	+		Atu1159	0.21	+0.2
1,154,432	+		Atu1159	0.32	-0.4
1,154,509	-		Atu1159	0.42	+0.5
1,154,552	+		Atu1159	0.48	-0.0
1,154,552	+		Atu1159	0.48	+0.1
1,154,596	+		Atu1159	0.54	+0.9
1,154,631	+		Atu1159	0.58	-0.1
1,154,636	+		Atu1159	0.59	-0.3
1,154,775	+		Atu1159	0.77	-0.2
1,154,905	+				-0.1
1,154,915	+				+1.3
1,155,296	+		Atu1160	0.37	-0.6
1,155,335	-		Atu1160	0.46	+0.0
1,155,337	+		Atu1160	0.46	-2.4
1,155,340	-		Atu1160	0.47	-0.7
1,155,417	-		Atu1160	0.64	-0.8
1,155,475	-		Atu1160	0.76	-0.8
1,155,571	+				-1.2
1,155,621	-				-0.1
1,155,687	-				+0.0
1,155,687	-				+0.3
1,155,687	-				+0.0