Strain Fitness in Agrobacterium fabrum C58 around Atu1044

Experiment: D(+)-Carvone 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D(+)-Carvone 5 mM
1,034,319	-		Atu1042	0.63	+0.2
1,034,389	-		Atu1042	0.71	-0.4
1,034,399	-		Atu1042	0.72	+0.5
1,034,597	+				-0.4
1,034,607	-				+0.2
1,034,652	-				-0.9
1,034,685	-				-0.1
1,034,743	+		Atu1043	0.15	+0.2
1,034,969	-		Atu1043	0.50	+0.1
1,035,020	-		Atu1043	0.58	+0.5
1,035,124	-		Atu1043	0.74	+0.1
1,035,177	-		Atu1043	0.82	+0.2
1,035,196	-		Atu1043	0.85	-0.0
1,035,244	-				-0.2
1,035,343	+				-0.5
1,035,392	-				-0.7
1,035,392	-				+0.1
1,035,538	-				+0.0
1,035,555	-		Atu1044	0.10	-0.4
1,035,555	-		Atu1044	0.10	-1.2
1,035,556	-		Atu1044	0.10	+0.8
1,035,580	-		Atu1044	0.11	-1.4
1,035,583	+		Atu1044	0.11	+0.4
1,035,613	+		Atu1044	0.12	+0.2
1,035,654	+		Atu1044	0.14	-0.3
1,035,699	+		Atu1044	0.16	-0.4
1,035,748	-		Atu1044	0.17	+0.2
1,035,818	+		Atu1044	0.20	-1.0
1,035,864	+		Atu1044	0.22	-3.1
1,035,959	+		Atu1044	0.25	+0.6
1,035,967	-		Atu1044	0.26	-0.6
1,036,191	-		Atu1044	0.34	-0.8
1,036,215	-		Atu1044	0.35	-0.1
1,036,225	+		Atu1044	0.35	-1.5
1,036,265	+		Atu1044	0.37	+0.1
1,036,277	+		Atu1044	0.37	-2.5
1,036,438	+		Atu1044	0.43	-0.4
1,036,458	-		Atu1044	0.44	-0.3
1,036,520	+		Atu1044	0.47	-0.3
1,036,551	+		Atu1044	0.48	-0.5
1,036,551	+		Atu1044	0.48	-0.6
1,036,559	-		Atu1044	0.48	-1.2
1,036,621	+		Atu1044	0.50	-0.4
1,036,629	-		Atu1044	0.51	+1.6
1,036,634	+		Atu1044	0.51	-0.5
1,036,659	+		Atu1044	0.52	+0.1
1,036,659	+		Atu1044	0.52	-0.8
1,036,667	-		Atu1044	0.52	-0.8
1,036,717	+		Atu1044	0.54	-0.5
1,036,791	+		Atu1044	0.57	-0.3
1,036,799	-		Atu1044	0.57	-0.7
1,036,799	-		Atu1044	0.57	-0.4
1,036,964	+		Atu1044	0.63	-1.5
1,037,042	+		Atu1044	0.66	+0.2
1,037,074	+		Atu1044	0.67	-1.3
1,037,074	+		Atu1044	0.67	-0.3
1,037,089	+		Atu1044	0.68	-0.9
1,037,094	+		Atu1044	0.68	-0.3
1,037,102	-		Atu1044	0.69	-0.9
1,037,131	-		Atu1044	0.70	-0.8
1,037,296	+		Atu1044	0.76	-1.4
1,037,304	-		Atu1044	0.76	-0.1
1,037,304	-		Atu1044	0.76	-1.2
1,037,311	+		Atu1044	0.76	-1.1
1,037,319	-		Atu1044	0.77	-0.5
1,037,415	+		Atu1044	0.80	-1.1
1,037,423	-		Atu1044	0.81	+0.2
1,037,508	+		Atu1044	0.84	-0.5
1,037,571	+		Atu1044	0.86	-0.9
1,037,650	-		Atu1044	0.89	-0.6
1,037,741	-				-0.7
1,037,741	-				-0.3
1,037,891	-				-0.8
1,037,926	-				-0.1
1,037,949	-				-0.4
1,038,014	+				-0.3
1,038,015	-				-0.7
1,038,036	+				-0.7
1,038,036	+				+0.6
1,038,044	-				-2.2
1,038,176	-				-0.4
1,038,246	-				-0.3
1,038,278	-				+0.2
1,038,393	+		Atu1045	0.13	+0.1
1,038,422	-		Atu1045	0.15	-0.4
1,038,480	+		Atu1045	0.19	+0.0
1,038,597	-		Atu1045	0.26	-0.6
1,038,632	+		Atu1045	0.28	+0.2
1,038,640	-		Atu1045	0.29	-0.8
1,038,667	+		Atu1045	0.31	-0.0
1,038,675	-		Atu1045	0.31	-1.2
1,038,739	+		Atu1045	0.35	+0.7
1,038,846	-		Atu1045	0.42	+0.1
1,038,861	+		Atu1045	0.43	+0.4
1,038,885	+		Atu1045	0.44	+0.5