Strain Fitness in Agrobacterium fabrum C58 around Atu2735

Experiment: D(+)-Carvone 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D(+)-Carvone 5 mM
2,729,671	+		Atu2734	0.13	+0.2
2,729,704	+		Atu2734	0.16	+0.2
2,729,721	+		Atu2734	0.18	+0.2
2,729,729	-		Atu2734	0.18	-0.4
2,729,729	-		Atu2734	0.18	-1.4
2,729,768	-		Atu2734	0.22	-0.4
2,729,822	+		Atu2734	0.27	-0.2
2,729,879	-		Atu2734	0.32	+0.1
2,729,918	-		Atu2734	0.36	-0.4
2,729,928	+		Atu2734	0.37	-0.7
2,729,933	+		Atu2734	0.37	+0.0
2,729,933	+		Atu2734	0.37	-0.0
2,729,933	+		Atu2734	0.37	+0.0
2,729,933	+		Atu2734	0.37	+0.2
2,729,933	+		Atu2734	0.37	-0.7
2,729,938	+		Atu2734	0.37	-0.1
2,729,938	+		Atu2734	0.37	+0.0
2,729,941	-		Atu2734	0.38	-0.5
2,729,941	-		Atu2734	0.38	-0.2
2,729,941	-		Atu2734	0.38	+0.1
2,729,979	-		Atu2734	0.41	+0.3
2,729,981	-		Atu2734	0.41	+0.2
2,729,981	-		Atu2734	0.41	-0.3
2,729,981	-		Atu2734	0.41	+1.2
2,730,276	+		Atu2734	0.68	-0.2
2,730,276	+		Atu2734	0.68	-0.7
2,730,282	+		Atu2734	0.69	+0.5
2,730,282	+		Atu2734	0.69	-0.3
2,730,284	-		Atu2734	0.69	-0.2
2,730,290	-		Atu2734	0.69	-0.2
2,730,314	+		Atu2734	0.71	-0.0
2,730,327	-		Atu2734	0.73	+0.3
2,730,347	+		Atu2734	0.74	+0.1
2,730,379	-		Atu2734	0.77	+0.3
2,730,381	+		Atu2734	0.78	+1.3
2,730,390	+		Atu2734	0.78	+0.2
2,730,449	+		Atu2734	0.84	+0.8
2,730,553	+				+0.6
2,730,561	-				-0.1
2,730,624	-				-0.7
2,730,900	+		Atu2735	0.28	-0.4
2,730,951	+		Atu2735	0.33	+0.4
2,730,951	+		Atu2735	0.33	-2.6
2,730,959	-		Atu2735	0.34	-0.6
2,730,959	-		Atu2735	0.34	+0.1
2,730,959	-		Atu2735	0.34	-0.6
2,731,003	-		Atu2735	0.38	-0.1
2,731,056	-		Atu2735	0.44	-0.4
2,731,072	-		Atu2735	0.45	-0.4
2,731,180	-		Atu2735	0.56	+0.3
2,731,220	+		Atu2735	0.60	+0.1
2,731,461	+		Atu2735	0.85	+0.1
2,731,469	-		Atu2735	0.86	-0.0
2,731,529	-				+0.0
2,731,534	+				-0.4
2,731,542	+				-0.1
2,731,609	-				+0.2
2,731,609	-				-0.1
2,731,609	-				-0.2
2,731,741	-				-0.1
2,731,792	-				+0.4
2,731,797	-				-0.2
2,731,914	+		Atu2736	0.10	-0.3
2,731,927	-		Atu2736	0.11	-0.5
2,732,012	-		Atu2736	0.16	-0.1
2,732,164	+		Atu2736	0.24	+0.7
2,732,176	+		Atu2736	0.25	-0.1
2,732,184	-		Atu2736	0.25	+0.1
2,732,202	+		Atu2736	0.26	+0.2
2,732,219	-		Atu2736	0.27	-0.4
2,732,393	+		Atu2736	0.37	+0.1
2,732,592	+		Atu2736	0.48	-0.5