Strain Fitness in Agrobacterium fabrum C58 around Atu0685
Experiment: D(+)-Carvone 5 mM
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | D(+)-Carvone 5 mM |
|---|---|---|---|---|---|
| remove | |||||
| 678,700 | + | -0.1 | |||
| 678,745 | + | -0.1 | |||
| 679,182 | + | Atu0684 | 0.56 | +0.0 | |
| 679,219 | + | Atu0684 | 0.61 | +0.4 | |
| 679,311 | + | Atu0684 | 0.71 | +0.8 | |
| 679,321 | + | Atu0684 | 0.73 | +0.3 | |
| 679,321 | + | Atu0684 | 0.73 | +0.7 | |
| 679,390 | + | Atu0684 | 0.81 | +0.2 | |
| 679,396 | + | Atu0684 | 0.82 | +0.9 | |
| 679,398 | - | Atu0684 | 0.82 | +0.2 | |
| 679,421 | - | Atu0684 | 0.84 | +3.5 | |
| 679,513 | + | +0.3 | |||
| 679,607 | + | -0.0 | |||
| 680,535 | - | -0.2 | |||
| 680,535 | - | +2.2 | |||
| 680,547 | - | -0.3 |
Or see this region's nucleotide sequence