Strain Fitness in Agrobacterium fabrum C58 around Atu4812

Experiment: Gallic Acid 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Gallic Acid 5 mM
1,990,631	+		Atu4811	0.19	-0.5
1,990,671	+		Atu4811	0.23	+0.5
1,990,693	+		Atu4811	0.25	+0.0
1,990,708	-		Atu4811	0.26	+0.3
1,990,754	+		Atu4811	0.30	+0.6
1,990,799	+		Atu4811	0.34	+0.3
1,990,926	-		Atu4811	0.45	+0.5
1,990,973	-		Atu4811	0.49	+0.8
1,990,986	+		Atu4811	0.50	-0.9
1,991,018	-		Atu4811	0.53	+0.6
1,991,041	+		Atu4811	0.55	-0.1
1,991,149	+		Atu4811	0.64	+0.3
1,991,155	-		Atu4811	0.65	-0.0
1,991,263	+		Atu4811	0.74	+0.4
1,991,279	-		Atu4811	0.76	+0.5
1,991,368	+		Atu4811	0.83	+0.5
1,991,412	+		Atu4811	0.87	+0.5
1,991,419	-		Atu4811	0.88	+0.1
1,991,431	+		Atu4811	0.89	+0.1
1,991,497	+				-0.2
1,991,586	-				+0.5
1,991,621	+				+0.6
1,991,621	+				+0.4
1,991,621	+				+0.4
1,991,621	+				-0.1
1,991,621	+				-0.4
1,991,621	+				-0.1
1,991,629	-				+0.9
1,991,657	-		Atu4812	0.13	+0.2
1,991,707	-		Atu4812	0.20	+0.3
1,991,820	-		Atu4812	0.36	-0.1
1,991,876	-		Atu4812	0.44	+0.7
1,991,920	+		Atu4812	0.51	+0.3
1,991,933	-		Atu4812	0.53	+0.5
1,991,956	+		Atu4812	0.56	+0.0
1,991,963	+		Atu4812	0.57	+0.3
1,991,995	+		Atu4812	0.62	+0.3
1,991,996	+		Atu4812	0.62	-0.5
1,992,003	-		Atu4812	0.63	+0.1
1,992,003	-		Atu4812	0.63	-0.3
1,992,004	-		Atu4812	0.63	-0.9
1,992,090	+		Atu4812	0.75	-0.2
1,992,132	-		Atu4812	0.81	-0.0
1,992,173	-		Atu4812	0.87	+0.4
1,992,197	+				-0.6
1,992,294	+				+0.4
1,992,302	-				+0.0
1,992,439	+				+0.3
1,992,444	+		Atu4813	0.10	+0.1
1,992,447	-		Atu4813	0.10	-0.1
1,992,454	+		Atu4813	0.11	+0.0
1,992,454	+		Atu4813	0.11	+0.1
1,992,454	+		Atu4813	0.11	+0.3
1,992,462	-		Atu4813	0.12	+0.1
1,992,489	-		Atu4813	0.14	+0.7
1,992,510	+		Atu4813	0.16	+0.5
1,992,667	-		Atu4813	0.28	+0.3
1,992,692	+		Atu4813	0.31	+0.4
1,992,709	+		Atu4813	0.32	-0.1
1,992,714	+		Atu4813	0.32	+0.2
1,992,717	-		Atu4813	0.33	+0.3
1,992,717	-		Atu4813	0.33	-0.6
1,992,722	-		Atu4813	0.33	+0.1
1,992,749	+		Atu4813	0.35	+0.4
1,992,769	-		Atu4813	0.37	-0.3
1,992,776	-		Atu4813	0.37	-0.1
1,992,784	+		Atu4813	0.38	+0.1
1,992,841	+		Atu4813	0.43	-0.6
1,992,929	+		Atu4813	0.50	+0.0
1,992,937	-		Atu4813	0.51	+0.1
1,992,937	-		Atu4813	0.51	-1.1
1,992,952	+		Atu4813	0.52	+0.1
1,992,952	+		Atu4813	0.52	-0.2
1,992,952	+		Atu4813	0.52	+0.2
1,992,960	-		Atu4813	0.53	+0.7
1,992,960	-		Atu4813	0.53	-0.1
1,992,960	-		Atu4813	0.53	-0.1
1,992,960	-		Atu4813	0.53	-0.2
1,992,960	-		Atu4813	0.53	+0.1
1,993,144	+		Atu4813	0.68	+0.6
1,993,144	+		Atu4813	0.68	-0.0
1,993,209	+		Atu4813	0.73	-0.5