Strain Fitness in Agrobacterium fabrum C58 around Atu4897
Experiment: Linalool 5 mM
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Linalool 5 mM |
---|---|---|---|---|---|
remove | |||||
2,073,689 | - | Atu4896 | 0.24 | +0.6 | |
2,073,691 | - | Atu4896 | 0.24 | +0.1 | |
2,073,838 | + | Atu4896 | 0.51 | -0.4 | |
2,073,889 | - | Atu4896 | 0.60 | -0.4 | |
2,074,002 | + | Atu4896 | 0.81 | -0.4 | |
2,074,216 | - | -0.4 | |||
2,074,216 | - | -0.4 | |||
2,074,281 | - | +0.7 | |||
2,074,305 | - | -0.4 | |||
2,074,440 | + | Atu4897 | 0.21 | +1.6 | |
2,074,525 | + | Atu4897 | 0.42 | +1.2 | |
2,074,543 | - | Atu4897 | 0.47 | +0.2 | |
2,074,607 | - | Atu4897 | 0.63 | +0.5 | |
2,074,746 | + | -2.0 | |||
2,074,986 | - | Atu4898 | 0.49 | -1.4 | |
2,075,098 | + | +1.2 | |||
2,075,098 | + | +1.2 | |||
2,075,294 | - | -0.8 | |||
2,075,449 | - | +1.5 |
Or see this region's nucleotide sequence