Experiment: Linalool 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Atu3357 and Atu3358 are separated by 295 nucleotides Atu3358 and Atu3359 overlap by 4 nucleotides Atu3359 and Atu3360 are separated by 12 nucleotides Atu3360 and Atu3361 are separated by 4 nucleotides
Atu3357: Atu3357 - amino acid ABC transporter substrate-binding protein, at 395,279 to 396,118
Atu3357
Atu3358: Atu3358 - amino acid ABC transporter permease, at 396,414 to 397,046
Atu3358
Atu3359: Atu3359 - amino acid ABC transporter permease, at 397,043 to 397,825
Atu3359
Atu3360: Atu3360 - amino acid ABC transporter ATPase/permease, at 397,838 to 398,653
Atu3360
Atu3361: Atu3361 - hypothetical protein, at 398,658 to 400,004
Atu3361
Position (kb) 397
398 Strain fitness (log2 ratio) -2
-1
0
1 at 396.060 kb on - strand at 396.089 kb on - strand at 396.100 kb on + strand at 396.336 kb on - strand at 396.387 kb on + strand at 396.387 kb on + strand at 396.485 kb on - strand, within Atu3358 at 396.490 kb on - strand, within Atu3358 at 396.492 kb on + strand, within Atu3358 at 396.626 kb on - strand, within Atu3358 at 396.626 kb on - strand, within Atu3358 at 396.626 kb on - strand, within Atu3358 at 396.626 kb on - strand, within Atu3358 at 396.696 kb on + strand, within Atu3358 at 396.906 kb on + strand, within Atu3358 at 396.911 kb on + strand, within Atu3358 at 396.919 kb on - strand, within Atu3358 at 396.921 kb on - strand, within Atu3358 at 396.933 kb on + strand, within Atu3358 at 397.000 kb on + strand at 397.034 kb on - strand at 397.097 kb on + strand at 397.105 kb on + strand at 397.128 kb on + strand, within Atu3359 at 397.166 kb on - strand, within Atu3359 at 397.327 kb on - strand, within Atu3359 at 397.338 kb on + strand, within Atu3359 at 397.367 kb on + strand, within Atu3359 at 397.375 kb on - strand, within Atu3359 at 397.405 kb on + strand, within Atu3359 at 397.426 kb on + strand, within Atu3359 at 397.434 kb on - strand, within Atu3359 at 397.434 kb on - strand, within Atu3359 at 397.519 kb on - strand, within Atu3359 at 397.540 kb on - strand, within Atu3359 at 397.541 kb on - strand, within Atu3359 at 397.566 kb on + strand, within Atu3359 at 397.572 kb on + strand, within Atu3359 at 397.579 kb on - strand, within Atu3359 at 397.580 kb on - strand, within Atu3359 at 397.754 kb on + strand at 397.824 kb on + strand at 397.832 kb on - strand at 397.848 kb on - strand at 397.848 kb on - strand at 397.848 kb on - strand at 397.861 kb on - strand at 397.900 kb on + strand at 397.933 kb on + strand, within Atu3360 at 397.944 kb on - strand, within Atu3360 at 398.015 kb on + strand, within Atu3360 at 398.023 kb on - strand, within Atu3360 at 398.067 kb on - strand, within Atu3360 at 398.079 kb on + strand, within Atu3360 at 398.087 kb on - strand, within Atu3360 at 398.270 kb on - strand, within Atu3360 at 398.330 kb on + strand, within Atu3360 at 398.338 kb on - strand, within Atu3360 at 398.369 kb on - strand, within Atu3360 at 398.515 kb on - strand, within Atu3360 at 398.540 kb on + strand, within Atu3360 at 398.553 kb on - strand, within Atu3360
Per-strain Table
Position Strand Gene LocusTag Fraction Linalool 5 mM remove 396,060 - +0.2 396,089 - -2.0 396,100 + +0.2 396,336 - -0.2 396,387 + +0.2 396,387 + +0.1 396,485 - Atu3358 0.11 -0.1 396,490 - Atu3358 0.12 -0.0 396,492 + Atu3358 0.12 +0.4 396,626 - Atu3358 0.33 -0.4 396,626 - Atu3358 0.33 -1.3 396,626 - Atu3358 0.33 -0.2 396,626 - Atu3358 0.33 -0.2 396,696 + Atu3358 0.45 -0.1 396,906 + Atu3358 0.78 -0.1 396,911 + Atu3358 0.79 -1.3 396,919 - Atu3358 0.80 +0.2 396,921 - Atu3358 0.80 +0.8 396,933 + Atu3358 0.82 +1.4 397,000 + +0.1 397,034 - +0.2 397,097 + +0.4 397,105 + +0.3 397,128 + Atu3359 0.11 -0.4 397,166 - Atu3359 0.16 -1.1 397,327 - Atu3359 0.36 -0.3 397,338 + Atu3359 0.38 -0.5 397,367 + Atu3359 0.41 -0.7 397,375 - Atu3359 0.42 -0.1 397,405 + Atu3359 0.46 -0.3 397,426 + Atu3359 0.49 -1.1 397,434 - Atu3359 0.50 -0.3 397,434 - Atu3359 0.50 -0.7 397,519 - Atu3359 0.61 -0.2 397,540 - Atu3359 0.63 +0.7 397,541 - Atu3359 0.64 -0.2 397,566 + Atu3359 0.67 -0.2 397,572 + Atu3359 0.68 +0.3 397,579 - Atu3359 0.68 -0.5 397,580 - Atu3359 0.69 -0.1 397,754 + +0.4 397,824 + -0.7 397,832 - -0.2 397,848 - +0.1 397,848 - +0.2 397,848 - -0.2 397,861 - -0.0 397,900 + +0.6 397,933 + Atu3360 0.12 -0.2 397,944 - Atu3360 0.13 -0.5 398,015 + Atu3360 0.22 +0.1 398,023 - Atu3360 0.23 -0.1 398,067 - Atu3360 0.28 +0.0 398,079 + Atu3360 0.30 +1.4 398,087 - Atu3360 0.31 +0.2 398,270 - Atu3360 0.53 -0.3 398,330 + Atu3360 0.60 -0.1 398,338 - Atu3360 0.61 +0.7 398,369 - Atu3360 0.65 +0.3 398,515 - Atu3360 0.83 +1.2 398,540 + Atu3360 0.86 -0.9 398,553 - Atu3360 0.88 +0.2
Or see this region's nucleotide sequence