Experiment: Linalool 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Atu2563 and Atu2564 overlap by 32 nucleotides Atu2564 and Atu2565 are separated by 3 nucleotides
Atu2563: Atu2563 - ABC transporter, nucleotide binding/ATPase protein (molybdenum), at 2,535,422 to 2,536,498
Atu2563
Atu2564: Atu2564 - molybdenum-binding transcriptional repressor, at 2,536,467 to 2,536,862
Atu2564
Atu2565: Atu2565 - hypothetical protein, at 2,536,866 to 2,537,870
Atu2565
Position (kb)
2536
2537 Strain fitness (log2 ratio)
-1
0
1 at 2535.778 kb on + strand, within Atu2563 at 2535.862 kb on + strand, within Atu2563 at 2535.870 kb on - strand, within Atu2563 at 2535.919 kb on + strand, within Atu2563 at 2535.919 kb on + strand, within Atu2563 at 2535.927 kb on - strand, within Atu2563 at 2535.927 kb on - strand, within Atu2563 at 2535.931 kb on + strand, within Atu2563 at 2536.059 kb on - strand, within Atu2563 at 2536.092 kb on - strand, within Atu2563 at 2536.239 kb on + strand, within Atu2563 at 2536.281 kb on + strand, within Atu2563 at 2536.293 kb on - strand, within Atu2563 at 2536.299 kb on + strand, within Atu2563 at 2536.299 kb on + strand, within Atu2563 at 2536.319 kb on + strand, within Atu2563 at 2536.368 kb on + strand, within Atu2563 at 2536.392 kb on + strand at 2536.418 kb on - strand at 2536.523 kb on + strand, within Atu2564 at 2536.563 kb on - strand, within Atu2564 at 2536.675 kb on - strand, within Atu2564 at 2536.724 kb on + strand, within Atu2564 at 2536.897 kb on + strand at 2536.942 kb on - strand at 2537.063 kb on + strand, within Atu2565 at 2537.081 kb on - strand, within Atu2565 at 2537.133 kb on - strand, within Atu2565 at 2537.159 kb on - strand, within Atu2565 at 2537.159 kb on - strand, within Atu2565 at 2537.204 kb on + strand, within Atu2565 at 2537.322 kb on + strand, within Atu2565 at 2537.448 kb on + strand, within Atu2565 at 2537.483 kb on + strand, within Atu2565 at 2537.506 kb on + strand, within Atu2565 at 2537.514 kb on - strand, within Atu2565 at 2537.524 kb on + strand, within Atu2565 at 2537.579 kb on - strand, within Atu2565 at 2537.582 kb on + strand, within Atu2565 at 2537.588 kb on + strand, within Atu2565 at 2537.597 kb on - strand, within Atu2565 at 2537.744 kb on - strand, within Atu2565 at 2537.789 kb on + strand at 2537.797 kb on - strand at 2537.823 kb on + strand at 2537.851 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Linalool 5 mM remove 2,535,778 + Atu2563 0.33 -0.0 2,535,862 + Atu2563 0.41 -0.4 2,535,870 - Atu2563 0.42 +0.3 2,535,919 + Atu2563 0.46 +0.1 2,535,919 + Atu2563 0.46 -0.6 2,535,927 - Atu2563 0.47 +0.2 2,535,927 - Atu2563 0.47 -0.2 2,535,931 + Atu2563 0.47 +0.6 2,536,059 - Atu2563 0.59 -0.1 2,536,092 - Atu2563 0.62 -0.1 2,536,239 + Atu2563 0.76 +0.1 2,536,281 + Atu2563 0.80 +0.1 2,536,293 - Atu2563 0.81 -0.2 2,536,299 + Atu2563 0.81 +0.1 2,536,299 + Atu2563 0.81 -1.5 2,536,319 + Atu2563 0.83 +0.6 2,536,368 + Atu2563 0.88 -0.6 2,536,392 + +0.4 2,536,418 - +0.1 2,536,523 + Atu2564 0.14 -0.0 2,536,563 - Atu2564 0.24 +0.3 2,536,675 - Atu2564 0.53 +0.2 2,536,724 + Atu2564 0.65 +0.4 2,536,897 + +0.1 2,536,942 - -0.4 2,537,063 + Atu2565 0.20 +0.0 2,537,081 - Atu2565 0.21 -0.1 2,537,133 - Atu2565 0.27 +0.0 2,537,159 - Atu2565 0.29 +0.4 2,537,159 - Atu2565 0.29 +0.2 2,537,204 + Atu2565 0.34 +0.4 2,537,322 + Atu2565 0.45 +0.2 2,537,448 + Atu2565 0.58 -0.0 2,537,483 + Atu2565 0.61 -0.1 2,537,506 + Atu2565 0.64 -0.4 2,537,514 - Atu2565 0.64 +0.3 2,537,524 + Atu2565 0.65 -1.1 2,537,579 - Atu2565 0.71 -0.5 2,537,582 + Atu2565 0.71 -0.4 2,537,588 + Atu2565 0.72 -1.3 2,537,597 - Atu2565 0.73 +0.1 2,537,744 - Atu2565 0.87 +0.4 2,537,789 + -0.4 2,537,797 - +0.0 2,537,823 + +0.4 2,537,851 + +0.5
Or see this region's nucleotide sequence