Strain Fitness in Agrobacterium fabrum C58 around Atu1998

Experiment: Linalool 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Linalool 5 mM
1,960,087	-		Atu1997	0.33	-1.0
1,960,103	+		Atu1997	0.34	-0.1
1,960,105	-		Atu1997	0.34	+0.0
1,960,141	-		Atu1997	0.37	+1.2
1,960,318	-		Atu1997	0.50	-0.2
1,960,398	-		Atu1997	0.56	-0.3
1,960,398	-		Atu1997	0.56	+1.4
1,960,423	+		Atu1997	0.57	-0.6
1,960,423	+		Atu1997	0.57	+0.7
1,960,563	+		Atu1997	0.68	-0.7
1,960,610	+		Atu1997	0.71	-0.3
1,960,641	+		Atu1997	0.73	+0.2
1,960,649	-		Atu1997	0.74	-1.3
1,960,838	-		Atu1997	0.88	+0.2
1,960,838	-		Atu1997	0.88	-0.1
1,960,838	-		Atu1997	0.88	-0.9
1,960,849	+		Atu1997	0.89	-0.3
1,960,942	-				-0.0
1,960,942	-				+0.1
1,961,030	-				+0.2
1,961,031	-				+0.0
1,961,082	-				-0.3
1,961,126	+		Atu1998	0.10	+1.1
1,961,240	+		Atu1998	0.34	+0.0
1,961,371	+		Atu1998	0.62	-0.2
1,961,377	-		Atu1998	0.63	+0.2
1,961,385	-		Atu1998	0.65	+0.2
1,961,511	+				-0.1
1,961,518	-				+0.2
1,961,519	-				-0.0
1,961,519	-				+0.1
1,961,769	-		Atu1999	0.33	-0.5
1,961,821	-		Atu1999	0.42	+0.2
1,961,903	-		Atu1999	0.55	-0.0
1,961,908	+		Atu1999	0.56	+0.1
1,961,925	+		Atu1999	0.59	+0.3
1,961,933	-		Atu1999	0.60	+0.1
1,961,933	-		Atu1999	0.60	+0.4
1,961,972	+		Atu1999	0.67	+0.2
1,961,975	-		Atu1999	0.67	-0.0
1,961,996	-		Atu1999	0.71	+0.2
1,962,100	-		Atu1999	0.88	-0.2
1,962,168	-				+0.1
1,962,177	+				-0.3
1,962,283	-				+0.1
1,962,295	+				+0.7
1,962,374	+		Atu2000	0.11	+0.2
1,962,374	+		Atu2000	0.11	+0.9
1,962,374	+		Atu2000	0.11	-0.0
1,962,374	+		Atu2000	0.11	+0.2
1,962,374	+		Atu2000	0.11	+0.6
1,962,374	+		Atu2000	0.11	-0.5
1,962,374	+		Atu2000	0.11	+0.0
1,962,374	+		Atu2000	0.11	-0.1
1,962,382	-		Atu2000	0.13	-0.3
1,962,382	-		Atu2000	0.13	+0.5
1,962,382	-		Atu2000	0.13	+0.4
1,962,382	-		Atu2000	0.13	+0.0
1,962,382	-		Atu2000	0.13	+0.0
1,962,382	-		Atu2000	0.13	+0.2
1,962,382	-		Atu2000	0.13	-0.2
1,962,382	-		Atu2000	0.13	-0.5
1,962,382	-		Atu2000	0.13	+1.4
1,962,401	-		Atu2000	0.18	-0.2
1,962,446	+		Atu2000	0.29	+0.1
1,962,449	-		Atu2000	0.30	-0.0
1,962,449	-		Atu2000	0.30	-1.0