Experiment: Linalool 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Atu5466 and Atu5467 are separated by 255 nucleotides Atu5467 and Atu5468 overlap by 21 nucleotides Atu5468 and Atu5469 are separated by 89 nucleotides Atu5469 and Atu5470 are separated by 17 nucleotides Atu5470 and Atu5471 are separated by 269 nucleotides
Atu5466: Atu5466 - potassium uptake protein, at 459,194 to 461,107
Atu5466
Atu5467: Atu5467 - hypothetical protein, at 461,363 to 461,674
Atu5467
Atu5468: Atu5468 - hypothetical protein, at 461,654 to 461,851
Atu5468
Atu5469: Atu5469 - DNA polymerase IV, at 461,941 to 463,014
Atu5469
Atu5470: Atu5470 - hypothetical protein, at 463,032 to 463,238
Atu5470
Atu5471: Atu5471 - hypothetical protein, at 463,508 to 463,744
Atu5471
Position (kb) 461
462
463
464 Strain fitness (log2 ratio) -1
0
1 at 460.943 kb on + strand at 460.948 kb on - strand at 461.021 kb on + strand at 461.073 kb on - strand at 461.086 kb on - strand at 461.103 kb on + strand at 461.159 kb on + strand at 461.239 kb on - strand at 461.264 kb on + strand at 461.267 kb on + strand at 461.285 kb on - strand at 461.300 kb on - strand at 461.428 kb on + strand, within Atu5467 at 461.435 kb on + strand, within Atu5467 at 461.453 kb on - strand, within Atu5467 at 461.493 kb on - strand, within Atu5467 at 461.544 kb on - strand, within Atu5467 at 461.634 kb on + strand, within Atu5467 at 461.671 kb on - strand at 461.736 kb on - strand, within Atu5468 at 461.736 kb on - strand, within Atu5468 at 461.780 kb on + strand, within Atu5468 at 461.851 kb on + strand at 461.933 kb on + strand at 461.963 kb on + strand at 462.002 kb on + strand at 462.010 kb on - strand at 462.072 kb on + strand, within Atu5469 at 462.171 kb on + strand, within Atu5469 at 462.178 kb on + strand, within Atu5469 at 462.186 kb on - strand, within Atu5469 at 462.249 kb on + strand, within Atu5469 at 462.252 kb on - strand, within Atu5469 at 462.257 kb on - strand, within Atu5469 at 462.389 kb on - strand, within Atu5469 at 462.567 kb on - strand, within Atu5469 at 462.628 kb on - strand, within Atu5469 at 462.631 kb on + strand, within Atu5469 at 462.681 kb on + strand, within Atu5469 at 462.684 kb on - strand, within Atu5469 at 462.686 kb on - strand, within Atu5469 at 462.701 kb on + strand, within Atu5469 at 462.718 kb on + strand, within Atu5469 at 462.771 kb on - strand, within Atu5469 at 462.811 kb on + strand, within Atu5469 at 462.822 kb on + strand, within Atu5469 at 462.837 kb on + strand, within Atu5469 at 462.894 kb on + strand, within Atu5469 at 462.902 kb on + strand, within Atu5469 at 462.911 kb on - strand at 462.938 kb on + strand at 462.938 kb on + strand at 463.142 kb on - strand, within Atu5470 at 463.143 kb on - strand, within Atu5470 at 463.191 kb on - strand, within Atu5470 at 463.242 kb on + strand at 463.250 kb on - strand at 463.270 kb on - strand at 463.330 kb on - strand at 463.330 kb on - strand at 463.539 kb on + strand, within Atu5471 at 463.606 kb on + strand, within Atu5471 at 463.629 kb on - strand, within Atu5471 at 463.672 kb on + strand, within Atu5471 at 463.733 kb on - strand at 463.744 kb on + strand at 463.754 kb on + strand at 463.781 kb on + strand at 463.791 kb on + strand at 463.810 kb on + strand at 463.870 kb on + strand at 463.889 kb on + strand at 463.889 kb on + strand at 463.889 kb on + strand at 463.889 kb on + strand at 463.889 kb on + strand at 463.889 kb on + strand at 463.897 kb on - strand at 463.897 kb on - strand at 463.897 kb on - strand at 463.897 kb on - strand at 463.938 kb on + strand at 463.977 kb on - strand at 463.977 kb on - strand at 463.977 kb on - strand at 463.991 kb on + strand at 463.995 kb on - strand at 463.996 kb on + strand at 464.004 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Linalool 5 mM remove 460,943 + +0.0 460,948 - +0.3 461,021 + +1.1 461,073 - +0.1 461,086 - +0.7 461,103 + -0.4 461,159 + -0.2 461,239 - -0.7 461,264 + +0.0 461,267 + -0.1 461,285 - +1.7 461,300 - -1.4 461,428 + Atu5467 0.21 +0.1 461,435 + Atu5467 0.23 -0.0 461,453 - Atu5467 0.29 -0.4 461,493 - Atu5467 0.42 -0.6 461,544 - Atu5467 0.58 +0.2 461,634 + Atu5467 0.87 +1.0 461,671 - +0.3 461,736 - Atu5468 0.41 +1.1 461,736 - Atu5468 0.41 +0.3 461,780 + Atu5468 0.64 +1.3 461,851 + +0.2 461,933 + -0.8 461,963 + -0.4 462,002 + +0.2 462,010 - +0.4 462,072 + Atu5469 0.12 +0.6 462,171 + Atu5469 0.21 +0.0 462,178 + Atu5469 0.22 +0.5 462,186 - Atu5469 0.23 +0.7 462,249 + Atu5469 0.29 -0.2 462,252 - Atu5469 0.29 +0.6 462,257 - Atu5469 0.29 -0.0 462,389 - Atu5469 0.42 -0.3 462,567 - Atu5469 0.58 +0.1 462,628 - Atu5469 0.64 -0.0 462,631 + Atu5469 0.64 +0.2 462,681 + Atu5469 0.69 +0.5 462,684 - Atu5469 0.69 -1.5 462,686 - Atu5469 0.69 -0.1 462,701 + Atu5469 0.71 +0.3 462,718 + Atu5469 0.72 +0.5 462,771 - Atu5469 0.77 +0.2 462,811 + Atu5469 0.81 +1.0 462,822 + Atu5469 0.82 +0.6 462,837 + Atu5469 0.83 +0.6 462,894 + Atu5469 0.89 -0.3 462,902 + Atu5469 0.89 +0.6 462,911 - +0.4 462,938 + +0.3 462,938 + +0.2 463,142 - Atu5470 0.53 -0.0 463,143 - Atu5470 0.54 +1.5 463,191 - Atu5470 0.77 +0.5 463,242 + +0.1 463,250 - -0.0 463,270 - -0.2 463,330 - -0.2 463,330 - +0.4 463,539 + Atu5471 0.13 +0.0 463,606 + Atu5471 0.41 -0.5 463,629 - Atu5471 0.51 -0.1 463,672 + Atu5471 0.69 -0.5 463,733 - +0.5 463,744 + -0.3 463,754 + -0.3 463,781 + +0.4 463,791 + -0.1 463,810 + +0.2 463,870 + -0.3 463,889 + -0.3 463,889 + +0.4 463,889 + +0.5 463,889 + -0.2 463,889 + -0.0 463,889 + +0.4 463,897 - +0.5 463,897 - -0.1 463,897 - +0.0 463,897 - -0.7 463,938 + +0.7 463,977 - -1.1 463,977 - +0.5 463,977 - +0.5 463,991 + +0.0 463,995 - +0.4 463,996 + -0.1 464,004 - +0.3
Or see this region's nucleotide sequence