Strain Fitness in Agrobacterium fabrum C58 around Atu4549

Experiment: Linalool 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Linalool 5 mM
1,693,079	+		Atu4547	0.66	+0.9
1,693,087	-		Atu4547	0.67	+0.2
1,693,087	-		Atu4547	0.67	-0.2
1,693,187	+		Atu4547	0.81	-0.1
1,693,187	-		Atu4547	0.81	-0.3
1,693,195	-		Atu4547	0.82	+0.3
1,693,319	-				-0.3
1,693,322	+				+1.4
1,693,348	+				+0.3
1,693,385	+				+0.5
1,693,385	+				-0.6
1,693,393	-		Atu4548	0.11	+0.8
1,693,393	-		Atu4548	0.11	-0.2
1,693,411	+		Atu4548	0.13	+0.0
1,693,524	+		Atu4548	0.29	-1.2
1,693,660	+		Atu4548	0.49	-0.2
1,693,678	-		Atu4548	0.52	-0.1
1,693,678	-		Atu4548	0.52	-0.2
1,693,752	+		Atu4548	0.62	-0.2
1,693,838	+		Atu4548	0.75	+0.3
1,693,866	-		Atu4548	0.79	+0.2
1,693,877	-		Atu4548	0.80	+0.1
1,693,879	+		Atu4548	0.80	+0.5
1,693,907	-		Atu4548	0.84	+0.5
1,694,034	+				-0.3
1,694,034	+				-0.1
1,694,061	+				+0.0
1,694,213	-		Atu4549	0.16	-0.6
1,694,216	+		Atu4549	0.16	+0.4
1,694,311	+		Atu4549	0.24	-0.4
1,694,338	+		Atu4549	0.26	-0.0
1,694,346	-		Atu4549	0.27	+0.9
1,694,387	-		Atu4549	0.30	+0.9
1,694,660	+		Atu4549	0.53	+0.2
1,694,660	+		Atu4549	0.53	+0.4
1,694,660	+		Atu4549	0.53	+0.6
1,694,660	+		Atu4549	0.53	+0.6
1,694,668	-		Atu4549	0.53	-0.5
1,694,668	-		Atu4549	0.53	+0.4
1,694,687	-		Atu4549	0.55	-0.0
1,694,713	+		Atu4549	0.57	+0.3
1,694,740	-		Atu4549	0.59	+0.6
1,694,740	-		Atu4549	0.59	+1.2
1,694,764	+		Atu4549	0.61	+0.2
1,694,962	+		Atu4549	0.78	+0.1
1,695,006	+		Atu4549	0.81	+0.1
1,695,067	-		Atu4549	0.86	+0.0
1,695,202	+				-0.5
1,695,208	-				-0.2
1,695,208	-				+0.4
1,695,298	+				+0.2
1,695,304	-				+1.0
1,695,326	+				-0.0
1,695,334	-				+1.1
1,695,386	-				-1.1
1,695,386	-				-0.2
1,695,389	+				-0.4
1,695,394	+				-1.1
1,695,401	-				+0.5
1,695,412	-				-0.1
1,695,463	-				+0.2
1,695,465	+				+1.8
1,695,473	-				-0.1
1,695,473	-				+1.4
1,695,484	+				+0.3
1,695,484	+				-0.1
1,695,504	-				+0.0
1,695,504	-				-0.2
1,695,519	-				-0.1
1,695,683	-				+1.1
1,695,862	+		Atu4550	0.18	-0.6
1,695,933	+		Atu4550	0.25	-0.3
1,695,936	-		Atu4550	0.25	-0.5
1,695,963	+		Atu4550	0.28	-1.8
1,695,971	-		Atu4550	0.29	-0.1
1,695,971	-		Atu4550	0.29	-0.2
1,695,971	-		Atu4550	0.29	+0.6
1,695,971	-		Atu4550	0.29	+0.2
1,696,029	+		Atu4550	0.34	+0.0
1,696,037	-		Atu4550	0.35	-0.1
1,696,041	-		Atu4550	0.35	-0.3
1,696,052	-		Atu4550	0.36	+2.1
1,696,073	-		Atu4550	0.38	+0.5
1,696,122	-		Atu4550	0.43	-0.4
1,696,166	+		Atu4550	0.48	+0.3
1,696,166	+		Atu4550	0.48	-0.3