Strain Fitness in Agrobacterium fabrum C58 around Atu4117

Experiment: Linalool 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Linalool 5 mM
1,235,505	+		Atu4115	0.89	-0.1
1,235,566	-				+0.6
1,235,677	-				+0.6
1,235,723	-		Atu4116	0.13	-0.0
1,235,733	-		Atu4116	0.14	+0.4
1,235,733	-		Atu4116	0.14	-0.1
1,235,762	-		Atu4116	0.18	-1.5
1,235,866	+		Atu4116	0.30	+1.0
1,235,893	+		Atu4116	0.33	-0.1
1,235,922	-		Atu4116	0.37	-0.7
1,235,970	-		Atu4116	0.42	-0.1
1,236,009	+		Atu4116	0.47	-0.3
1,236,014	+		Atu4116	0.48	+0.7
1,236,014	+		Atu4116	0.48	-0.8
1,236,058	-		Atu4116	0.53	-0.4
1,236,084	-		Atu4116	0.56	+0.8
1,236,094	-		Atu4116	0.57	-1.0
1,236,301	-		Atu4116	0.82	-0.1
1,236,324	+		Atu4116	0.85	+0.2
1,236,371	+				+0.1
1,236,371	+				+0.7
1,236,371	+				+1.0
1,236,379	-				-0.3
1,236,475	-				+0.2
1,236,503	+				-0.2
1,236,533	+				-1.2
1,236,666	-		Atu4117	0.26	+1.3
1,236,717	+		Atu4117	0.32	-0.6
1,236,733	-		Atu4117	0.34	-0.0
1,236,859	+		Atu4117	0.48	+2.2
1,236,859	+		Atu4117	0.48	+0.8
1,236,867	-		Atu4117	0.49	-0.3
1,237,030	-		Atu4117	0.69	+0.4
1,237,142	+		Atu4117	0.82	+0.9
1,237,143	-		Atu4117	0.82	+0.1
1,237,145	+		Atu4117	0.82	+0.6
1,237,151	-		Atu4117	0.83	-0.0
1,237,153	+		Atu4117	0.83	+1.0
1,237,249	-				-0.2
1,237,409	-				+0.9
1,237,478	+		Atu4118	0.18	-0.3
1,237,488	-		Atu4118	0.19	+0.5
1,237,525	+		Atu4118	0.25	-0.0
1,237,661	-		Atu4118	0.45	-0.2
1,237,678	+		Atu4118	0.48	+0.4
1,237,686	-		Atu4118	0.49	-0.4
1,237,789	-		Atu4118	0.64	+0.0
1,237,799	-		Atu4118	0.65	-0.0
1,237,801	-		Atu4118	0.66	+0.4
1,237,891	-		Atu4118	0.79	+0.1
1,237,968	+				+1.4
1,238,020	-				-0.1
1,238,231	+				-0.2