Experiment: Linalool 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Atu3910 and Atu3911 are separated by 11 nucleotides Atu3911 and Atu3912 are separated by 7 nucleotides Atu3912 and Atu3913 overlap by 4 nucleotides
Atu3910: Atu3910 - LamB/YcsF family protein, at 1,009,717 to 1,010,484
Atu3910
Atu3911: Atu3911 - hypothetical protein, at 1,010,496 to 1,011,305
Atu3911
Atu3912: Atu3912 - hypothetical protein, at 1,011,313 to 1,012,923
Atu3912
Atu3913: Atu3913 - biotin carboxylase, at 1,012,920 to 1,014,650
Atu3913
Position (kb)
1011
1012
1013 Strain fitness (log2 ratio)
-1
0
1 at 1010.515 kb on + strand at 1010.527 kb on - strand at 1010.867 kb on - strand, within Atu3911 at 1010.923 kb on + strand, within Atu3911 at 1010.948 kb on - strand, within Atu3911 at 1011.190 kb on - strand, within Atu3911 at 1011.234 kb on + strand at 1011.236 kb on - strand at 1011.236 kb on - strand at 1011.247 kb on + strand at 1011.545 kb on + strand, within Atu3912 at 1011.614 kb on + strand, within Atu3912 at 1011.720 kb on - strand, within Atu3912 at 1011.739 kb on - strand, within Atu3912 at 1011.791 kb on - strand, within Atu3912 at 1011.812 kb on - strand, within Atu3912 at 1011.882 kb on + strand, within Atu3912 at 1011.918 kb on + strand, within Atu3912 at 1012.033 kb on + strand, within Atu3912 at 1012.053 kb on + strand, within Atu3912 at 1012.145 kb on + strand, within Atu3912 at 1012.145 kb on + strand, within Atu3912 at 1012.145 kb on + strand, within Atu3912 at 1012.153 kb on - strand, within Atu3912 at 1012.288 kb on - strand, within Atu3912 at 1012.570 kb on + strand, within Atu3912 at 1012.658 kb on + strand, within Atu3912 at 1012.663 kb on + strand, within Atu3912 at 1012.682 kb on - strand, within Atu3912 at 1012.864 kb on + strand at 1013.060 kb on - strand at 1013.145 kb on - strand, within Atu3913 at 1013.216 kb on + strand, within Atu3913 at 1013.224 kb on - strand, within Atu3913 at 1013.224 kb on - strand, within Atu3913 at 1013.224 kb on - strand, within Atu3913 at 1013.233 kb on + strand, within Atu3913 at 1013.241 kb on - strand, within Atu3913 at 1013.354 kb on - strand, within Atu3913 at 1013.481 kb on + strand, within Atu3913 at 1013.552 kb on + strand, within Atu3913 at 1013.876 kb on - strand, within Atu3913
Per-strain Table
Position Strand Gene LocusTag Fraction Linalool 5 mM remove 1,010,515 + -0.3 1,010,527 - -0.6 1,010,867 - Atu3911 0.46 -0.3 1,010,923 + Atu3911 0.53 -0.1 1,010,948 - Atu3911 0.56 -0.9 1,011,190 - Atu3911 0.86 -1.7 1,011,234 + -0.2 1,011,236 - -0.4 1,011,236 - -0.2 1,011,247 + +0.4 1,011,545 + Atu3912 0.14 +0.1 1,011,614 + Atu3912 0.19 -0.7 1,011,720 - Atu3912 0.25 -1.1 1,011,739 - Atu3912 0.26 -1.1 1,011,791 - Atu3912 0.30 -0.7 1,011,812 - Atu3912 0.31 -0.2 1,011,882 + Atu3912 0.35 -0.7 1,011,918 + Atu3912 0.38 +0.1 1,012,033 + Atu3912 0.45 -0.2 1,012,053 + Atu3912 0.46 -0.8 1,012,145 + Atu3912 0.52 +0.5 1,012,145 + Atu3912 0.52 -0.5 1,012,145 + Atu3912 0.52 -1.6 1,012,153 - Atu3912 0.52 +0.3 1,012,288 - Atu3912 0.61 -0.1 1,012,570 + Atu3912 0.78 +1.4 1,012,658 + Atu3912 0.83 -0.5 1,012,663 + Atu3912 0.84 +0.4 1,012,682 - Atu3912 0.85 -0.7 1,012,864 + -0.9 1,013,060 - -0.6 1,013,145 - Atu3913 0.13 +0.5 1,013,216 + Atu3913 0.17 -0.4 1,013,224 - Atu3913 0.18 -0.4 1,013,224 - Atu3913 0.18 -0.3 1,013,224 - Atu3913 0.18 -0.1 1,013,233 + Atu3913 0.18 +0.1 1,013,241 - Atu3913 0.19 -0.4 1,013,354 - Atu3913 0.25 +0.3 1,013,481 + Atu3913 0.32 -0.3 1,013,552 + Atu3913 0.37 -0.7 1,013,876 - Atu3913 0.55 -0.1
Or see this region's nucleotide sequence