Experiment: Linalool 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Atu3393 and Atu3394 overlap by 4 nucleotides Atu3394 and Atu3395 overlap by 4 nucleotides Atu3395 and Atu3396 are separated by 71 nucleotides
Atu3393: Atu3393 - pseudoazurin, at 437,676 to 438,116
Atu3393
Atu3394: Atu3394 - iron ABC transporter ATPase, at 438,113 to 438,913
Atu3394
Atu3395: Atu3395 - iron (III ABC transporter permease ABC transporter permease, at 438,910 to 439,863
Atu3395
Atu3396: Atu3396 - ABC transporter substrate-binding protein, at 439,935 to 440,966
Atu3396
Position (kb) 438
439
440 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 438.070 kb on + strand, within Atu3393 at 438.088 kb on - strand at 438.107 kb on - strand at 438.292 kb on + strand, within Atu3394 at 438.784 kb on - strand, within Atu3394 at 438.801 kb on - strand, within Atu3394 at 438.988 kb on - strand at 439.080 kb on - strand, within Atu3395 at 439.083 kb on + strand, within Atu3395 at 439.089 kb on + strand, within Atu3395 at 439.187 kb on + strand, within Atu3395 at 439.207 kb on - strand, within Atu3395 at 439.258 kb on + strand, within Atu3395 at 439.274 kb on + strand, within Atu3395 at 439.377 kb on - strand, within Atu3395 at 439.480 kb on + strand, within Atu3395 at 439.507 kb on - strand, within Atu3395 at 439.682 kb on - strand, within Atu3395 at 439.742 kb on + strand, within Atu3395 at 439.742 kb on - strand, within Atu3395 at 439.754 kb on + strand, within Atu3395 at 439.802 kb on + strand at 439.991 kb on - strand at 440.053 kb on - strand, within Atu3396 at 440.242 kb on + strand, within Atu3396 at 440.354 kb on - strand, within Atu3396 at 440.358 kb on - strand, within Atu3396 at 440.358 kb on - strand, within Atu3396 at 440.358 kb on - strand, within Atu3396 at 440.394 kb on + strand, within Atu3396 at 440.467 kb on - strand, within Atu3396 at 440.486 kb on + strand, within Atu3396 at 440.494 kb on - strand, within Atu3396 at 440.531 kb on + strand, within Atu3396 at 440.628 kb on - strand, within Atu3396 at 440.635 kb on - strand, within Atu3396 at 440.635 kb on - strand, within Atu3396 at 440.694 kb on - strand, within Atu3396 at 440.710 kb on - strand, within Atu3396 at 440.710 kb on - strand, within Atu3396 at 440.728 kb on + strand, within Atu3396 at 440.795 kb on + strand, within Atu3396 at 440.801 kb on + strand, within Atu3396 at 440.823 kb on - strand, within Atu3396
Per-strain Table
Position Strand Gene LocusTag Fraction Linalool 5 mM remove 438,070 + Atu3393 0.89 -0.3 438,088 - -0.0 438,107 - -0.4 438,292 + Atu3394 0.22 -1.8 438,784 - Atu3394 0.84 -0.2 438,801 - Atu3394 0.86 -0.7 438,988 - -0.9 439,080 - Atu3395 0.18 -0.6 439,083 + Atu3395 0.18 -0.3 439,089 + Atu3395 0.19 -1.2 439,187 + Atu3395 0.29 +0.1 439,207 - Atu3395 0.31 -0.8 439,258 + Atu3395 0.36 -2.8 439,274 + Atu3395 0.38 -0.9 439,377 - Atu3395 0.49 -1.1 439,480 + Atu3395 0.60 -0.2 439,507 - Atu3395 0.63 +0.1 439,682 - Atu3395 0.81 -0.0 439,742 + Atu3395 0.87 -0.0 439,742 - Atu3395 0.87 -0.8 439,754 + Atu3395 0.88 -1.2 439,802 + -1.8 439,991 - -1.5 440,053 - Atu3396 0.11 +0.2 440,242 + Atu3396 0.30 -1.4 440,354 - Atu3396 0.41 -0.6 440,358 - Atu3396 0.41 +0.7 440,358 - Atu3396 0.41 -0.1 440,358 - Atu3396 0.41 +0.9 440,394 + Atu3396 0.44 -1.0 440,467 - Atu3396 0.52 +0.2 440,486 + Atu3396 0.53 -0.7 440,494 - Atu3396 0.54 -0.6 440,531 + Atu3396 0.58 -1.0 440,628 - Atu3396 0.67 -0.6 440,635 - Atu3396 0.68 -0.3 440,635 - Atu3396 0.68 -0.4 440,694 - Atu3396 0.74 -0.2 440,710 - Atu3396 0.75 -0.4 440,710 - Atu3396 0.75 -0.3 440,728 + Atu3396 0.77 -1.0 440,795 + Atu3396 0.83 -0.7 440,801 + Atu3396 0.84 -1.5 440,823 - Atu3396 0.86 +0.3
Or see this region's nucleotide sequence