Experiment: Linalool 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Atu1139 and Atu1140 are separated by 134 nucleotides Atu1140 and Atu1141 are separated by 65 nucleotides Atu1141 and Atu1142 are separated by 283 nucleotides
Atu1139: Atu1139 - hypothetical protein, at 1,128,351 to 1,128,821
Atu1139
Atu1140: Atu1140 - phosphoribosyalaminoimidazole-succinocarboxamide synthase, at 1,128,956 to 1,129,561
Atu1140
Atu1141: Atu1141 - Phosphoribosylglycinamide synthetase, at 1,129,627 to 1,130,700
Atu1141
Atu1142: Atu1142 - permease, at 1,130,984 to 1,132,141
Atu1142
Position (kb)
1129
1130
1131 Strain fitness (log2 ratio)
-1
0
1 at 1128.629 kb on - strand, within Atu1139 at 1128.636 kb on - strand, within Atu1139 at 1128.698 kb on + strand, within Atu1139 at 1128.705 kb on - strand, within Atu1139 at 1128.741 kb on + strand, within Atu1139 at 1128.772 kb on + strand, within Atu1139 at 1128.777 kb on + strand at 1128.777 kb on + strand at 1128.782 kb on - strand at 1128.845 kb on + strand at 1128.853 kb on - strand at 1129.076 kb on - strand, within Atu1140 at 1129.117 kb on - strand, within Atu1140 at 1129.144 kb on + strand, within Atu1140 at 1129.240 kb on - strand, within Atu1140 at 1129.550 kb on - strand at 1129.550 kb on - strand at 1129.605 kb on - strand at 1129.640 kb on - strand at 1129.738 kb on - strand, within Atu1141 at 1130.043 kb on - strand, within Atu1141 at 1130.114 kb on + strand, within Atu1141 at 1130.114 kb on + strand, within Atu1141 at 1130.214 kb on - strand, within Atu1141 at 1130.396 kb on - strand, within Atu1141 at 1130.465 kb on - strand, within Atu1141 at 1130.514 kb on + strand, within Atu1141 at 1130.744 kb on + strand at 1130.828 kb on + strand at 1130.828 kb on + strand at 1130.836 kb on - strand at 1130.888 kb on + strand at 1130.901 kb on + strand at 1130.909 kb on + strand at 1130.917 kb on - strand at 1130.920 kb on + strand at 1130.927 kb on + strand at 1130.943 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Linalool 5 mM remove 1,128,629 - Atu1139 0.59 +0.7 1,128,636 - Atu1139 0.61 +1.1 1,128,698 + Atu1139 0.74 -0.4 1,128,705 - Atu1139 0.75 -0.7 1,128,741 + Atu1139 0.83 +0.2 1,128,772 + Atu1139 0.89 +1.4 1,128,777 + -0.6 1,128,777 + +1.4 1,128,782 - -0.0 1,128,845 + -0.3 1,128,853 - +0.2 1,129,076 - Atu1140 0.20 -0.8 1,129,117 - Atu1140 0.27 -0.5 1,129,144 + Atu1140 0.31 -0.5 1,129,240 - Atu1140 0.47 -0.8 1,129,550 - -0.4 1,129,550 - -0.9 1,129,605 - -0.5 1,129,640 - +0.2 1,129,738 - Atu1141 0.10 -1.1 1,130,043 - Atu1141 0.39 -0.4 1,130,114 + Atu1141 0.45 -0.6 1,130,114 + Atu1141 0.45 -0.6 1,130,214 - Atu1141 0.55 -0.6 1,130,396 - Atu1141 0.72 -0.6 1,130,465 - Atu1141 0.78 -0.2 1,130,514 + Atu1141 0.83 -0.4 1,130,744 + -0.3 1,130,828 + +0.3 1,130,828 + +0.3 1,130,836 - -1.0 1,130,888 + -0.2 1,130,901 + +0.9 1,130,909 + -0.3 1,130,917 - +0.0 1,130,920 + -0.5 1,130,927 + +1.7 1,130,943 + -0.1
Or see this region's nucleotide sequence