Experiment: Linalool 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Atu0678 and Atu0679 overlap by 4 nucleotides Atu0679 and Atu0680 are separated by 64 nucleotides Atu0680 and Atu0681 are separated by 110 nucleotides Atu0681 and Atu8056 are separated by 208 nucleotides
Atu0678: Atu0678 - histidyl-tRNA synthetase, at 672,807 to 673,934
Atu0678
Atu0679: Atu0679 - ATP phosphoribosyltransferase, at 673,931 to 674,623
Atu0679
Atu0680: Atu0680 - hypothetical protein, at 674,688 to 675,179
Atu0680
Atu0681: Atu0681 - hypothetical protein, at 675,290 to 675,724
Atu0681
Atu8056: Atu8056 - hypothetical protein, at 675,933 to 676,265
Atu8056
Position (kb) 674
675
676 Strain fitness (log2 ratio) -1
0
1
2 at 673.697 kb on - strand, within Atu0678 at 673.802 kb on - strand, within Atu0678 at 673.901 kb on + strand at 673.929 kb on + strand at 673.993 kb on - strand at 674.162 kb on + strand, within Atu0679 at 674.162 kb on + strand, within Atu0679 at 674.170 kb on - strand, within Atu0679 at 674.255 kb on + strand, within Atu0679 at 674.286 kb on - strand, within Atu0679 at 674.387 kb on - strand, within Atu0679 at 674.407 kb on - strand, within Atu0679 at 674.428 kb on + strand, within Atu0679 at 674.473 kb on - strand, within Atu0679 at 674.686 kb on + strand at 674.759 kb on + strand, within Atu0680 at 674.767 kb on - strand, within Atu0680 at 674.767 kb on - strand, within Atu0680 at 674.831 kb on - strand, within Atu0680 at 674.852 kb on + strand, within Atu0680 at 674.970 kb on - strand, within Atu0680 at 674.975 kb on - strand, within Atu0680 at 675.182 kb on - strand at 675.185 kb on + strand at 675.456 kb on + strand, within Atu0681 at 675.464 kb on - strand, within Atu0681 at 675.493 kb on + strand, within Atu0681 at 675.502 kb on + strand, within Atu0681 at 675.522 kb on - strand, within Atu0681 at 675.527 kb on - strand, within Atu0681 at 675.649 kb on + strand, within Atu0681 at 675.659 kb on + strand, within Atu0681 at 675.720 kb on + strand at 675.730 kb on - strand at 675.735 kb on - strand at 675.817 kb on - strand at 676.123 kb on + strand, within Atu8056
Per-strain Table
Position Strand Gene LocusTag Fraction Linalool 5 mM remove 673,697 - Atu0678 0.79 -0.6 673,802 - Atu0678 0.88 +0.1 673,901 + +0.4 673,929 + -0.1 673,993 - -0.6 674,162 + Atu0679 0.33 +0.5 674,162 + Atu0679 0.33 -0.4 674,170 - Atu0679 0.34 +0.9 674,255 + Atu0679 0.47 -0.1 674,286 - Atu0679 0.51 +0.0 674,387 - Atu0679 0.66 +1.1 674,407 - Atu0679 0.69 +0.3 674,428 + Atu0679 0.72 +0.0 674,473 - Atu0679 0.78 -0.4 674,686 + -0.1 674,759 + Atu0680 0.14 +0.1 674,767 - Atu0680 0.16 +1.4 674,767 - Atu0680 0.16 +0.4 674,831 - Atu0680 0.29 +0.5 674,852 + Atu0680 0.33 -0.1 674,970 - Atu0680 0.57 +2.2 674,975 - Atu0680 0.58 -0.5 675,182 - -0.4 675,185 + +0.3 675,456 + Atu0681 0.38 -0.3 675,464 - Atu0681 0.40 +1.1 675,493 + Atu0681 0.47 +1.2 675,502 + Atu0681 0.49 -0.1 675,522 - Atu0681 0.53 -0.1 675,527 - Atu0681 0.54 +0.2 675,649 + Atu0681 0.83 +1.1 675,659 + Atu0681 0.85 +0.4 675,720 + +0.1 675,730 - -0.1 675,735 - +0.1 675,817 - +0.9 676,123 + Atu8056 0.57 +0.1
Or see this region's nucleotide sequence