Experiment: Menthol 1.25 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Atu0670 and Atu8085 overlap by 4 nucleotides Atu8085 and Atu0671 are separated by 25 nucleotides Atu0671 and Atu0672 are separated by 207 nucleotides
Atu0670: Atu0670 - 3-methyladenine-DNA glycosylase, at 666,323 to 666,952
Atu0670
Atu8085: Atu8085 - hypothetical protein, at 666,949 to 667,392
Atu8085
Atu0671: Atu0671 - hypothetical protein, at 667,418 to 668,335
Atu0671
Atu0672: Atu0672 - transcriptional regulator, LysR family, at 668,543 to 669,460
Atu0672
Position (kb) 667
668
669 Strain fitness (log2 ratio) -2
-1
0
1 at 666.423 kb on - strand, within Atu0670 at 666.429 kb on - strand, within Atu0670 at 666.460 kb on + strand, within Atu0670 at 666.506 kb on - strand, within Atu0670 at 666.506 kb on - strand, within Atu0670 at 666.511 kb on - strand, within Atu0670 at 666.577 kb on + strand, within Atu0670 at 666.579 kb on + strand, within Atu0670 at 666.703 kb on + strand, within Atu0670 at 666.752 kb on - strand, within Atu0670 at 666.752 kb on - strand, within Atu0670 at 666.765 kb on + strand, within Atu0670 at 666.865 kb on + strand, within Atu0670 at 666.865 kb on + strand, within Atu0670 at 666.873 kb on - strand, within Atu0670 at 666.876 kb on - strand, within Atu0670 at 667.063 kb on - strand, within Atu8085 at 667.063 kb on - strand, within Atu8085 at 667.149 kb on + strand, within Atu8085 at 667.156 kb on - strand, within Atu8085 at 667.181 kb on - strand, within Atu8085 at 667.221 kb on - strand, within Atu8085 at 667.266 kb on + strand, within Atu8085 at 667.266 kb on + strand, within Atu8085 at 667.282 kb on - strand, within Atu8085 at 667.321 kb on + strand, within Atu8085 at 667.385 kb on - strand at 667.387 kb on + strand at 667.406 kb on + strand at 667.414 kb on - strand at 667.416 kb on + strand at 667.416 kb on + strand at 667.434 kb on + strand at 667.578 kb on - strand, within Atu0671 at 667.789 kb on - strand, within Atu0671 at 667.797 kb on + strand, within Atu0671 at 667.876 kb on + strand, within Atu0671 at 667.876 kb on + strand, within Atu0671 at 667.876 kb on + strand, within Atu0671 at 668.151 kb on + strand, within Atu0671 at 668.167 kb on + strand, within Atu0671 at 668.168 kb on + strand, within Atu0671 at 668.244 kb on + strand at 668.404 kb on + strand at 668.445 kb on + strand at 668.457 kb on + strand at 668.494 kb on - strand at 668.547 kb on + strand at 668.599 kb on - strand at 668.599 kb on - strand at 668.834 kb on + strand, within Atu0672 at 668.834 kb on + strand, within Atu0672 at 668.842 kb on - strand, within Atu0672 at 668.868 kb on + strand, within Atu0672 at 668.948 kb on + strand, within Atu0672 at 668.948 kb on + strand, within Atu0672 at 668.953 kb on + strand, within Atu0672 at 668.956 kb on - strand, within Atu0672 at 668.975 kb on - strand, within Atu0672 at 669.002 kb on + strand, within Atu0672 at 669.011 kb on + strand, within Atu0672 at 669.033 kb on + strand, within Atu0672 at 669.059 kb on - strand, within Atu0672 at 669.083 kb on - strand, within Atu0672 at 669.112 kb on + strand, within Atu0672 at 669.119 kb on - strand, within Atu0672 at 669.122 kb on - strand, within Atu0672 at 669.133 kb on + strand, within Atu0672 at 669.133 kb on + strand, within Atu0672
Per-strain Table
Position Strand Gene LocusTag Fraction Menthol 1.25 mM remove 666,423 - Atu0670 0.16 -0.1 666,429 - Atu0670 0.17 -0.0 666,460 + Atu0670 0.22 -0.7 666,506 - Atu0670 0.29 -0.9 666,506 - Atu0670 0.29 +0.1 666,511 - Atu0670 0.30 -0.3 666,577 + Atu0670 0.40 +0.3 666,579 + Atu0670 0.41 -0.2 666,703 + Atu0670 0.60 -0.2 666,752 - Atu0670 0.68 -0.2 666,752 - Atu0670 0.68 +0.1 666,765 + Atu0670 0.70 -0.2 666,865 + Atu0670 0.86 -0.0 666,865 + Atu0670 0.86 -0.0 666,873 - Atu0670 0.87 +0.1 666,876 - Atu0670 0.88 -0.1 667,063 - Atu8085 0.26 -0.0 667,063 - Atu8085 0.26 -0.5 667,149 + Atu8085 0.45 -0.2 667,156 - Atu8085 0.47 -0.1 667,181 - Atu8085 0.52 -0.1 667,221 - Atu8085 0.61 -0.1 667,266 + Atu8085 0.71 -0.8 667,266 + Atu8085 0.71 -0.2 667,282 - Atu8085 0.75 +1.0 667,321 + Atu8085 0.84 +0.7 667,385 - +0.8 667,387 + -0.5 667,406 + +0.1 667,414 - -0.5 667,416 + -0.0 667,416 + +1.1 667,434 + +0.7 667,578 - Atu0671 0.17 +0.5 667,789 - Atu0671 0.40 -0.0 667,797 + Atu0671 0.41 +0.8 667,876 + Atu0671 0.50 +0.5 667,876 + Atu0671 0.50 +1.5 667,876 + Atu0671 0.50 +0.2 668,151 + Atu0671 0.80 +0.5 668,167 + Atu0671 0.82 +1.0 668,168 + Atu0671 0.82 -0.0 668,244 + +0.6 668,404 + -0.2 668,445 + +0.5 668,457 + +0.1 668,494 - +0.3 668,547 + -0.1 668,599 - -1.0 668,599 - -0.7 668,834 + Atu0672 0.32 +1.5 668,834 + Atu0672 0.32 -0.2 668,842 - Atu0672 0.33 +0.3 668,868 + Atu0672 0.35 -1.2 668,948 + Atu0672 0.44 +0.6 668,948 + Atu0672 0.44 +0.5 668,953 + Atu0672 0.45 +0.2 668,956 - Atu0672 0.45 +0.1 668,975 - Atu0672 0.47 -0.1 669,002 + Atu0672 0.50 +0.4 669,011 + Atu0672 0.51 -2.2 669,033 + Atu0672 0.53 -0.1 669,059 - Atu0672 0.56 -0.1 669,083 - Atu0672 0.59 -0.1 669,112 + Atu0672 0.62 +0.3 669,119 - Atu0672 0.63 -0.6 669,122 - Atu0672 0.63 -0.9 669,133 + Atu0672 0.64 -0.3 669,133 + Atu0672 0.64 -0.3
Or see this region's nucleotide sequence