Strain Fitness in Agrobacterium fabrum C58 around Atu3023

Experiment: Guaiacol 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Guaiacol 5 mM
14,493	-				-0.3
14,509	+				-0.2
14,563	-				-0.2
14,655	+		Atu3022	0.14	+0.0
14,794	+		Atu3022	0.29	-1.5
14,794	+		Atu3022	0.29	-0.2
14,800	+		Atu3022	0.30	+0.0
14,800	+		Atu3022	0.30	-0.2
14,848	+		Atu3022	0.35	-1.1
14,856	-		Atu3022	0.36	+1.2
14,861	-		Atu3022	0.36	+0.0
14,863	+		Atu3022	0.36	+0.2
14,863	+		Atu3022	0.36	-0.2
14,863	+		Atu3022	0.36	-0.2
14,866	-		Atu3022	0.37	-0.2
14,869	-		Atu3022	0.37	-0.9
14,871	-		Atu3022	0.37	+0.0
14,871	-		Atu3022	0.37	+0.2
14,919	-		Atu3022	0.42	-0.3
14,990	+		Atu3022	0.50	+0.3
15,055	+		Atu3022	0.57	+1.2
15,158	+		Atu3022	0.68	-1.4
15,158	+		Atu3022	0.68	+1.3
15,183	+		Atu3022	0.71	-0.9
15,191	-		Atu3022	0.72	-0.3
15,283	+		Atu3022	0.82	-0.8
15,336	+		Atu3022	0.87	-0.3
15,351	-		Atu3022	0.89	-0.2
15,362	+				+0.0
15,367	+				-0.7
15,370	-				+1.4
15,372	+				-1.1
15,558	-		Atu3023	0.11	-0.7
15,566	-		Atu3023	0.11	-0.1
15,579	+		Atu3023	0.13	-0.2
15,631	-		Atu3023	0.19	-0.3
15,680	+		Atu3023	0.24	-0.1
15,688	-		Atu3023	0.25	-1.3
15,688	-		Atu3023	0.25	-1.2
15,715	-		Atu3023	0.28	-0.1
15,716	-		Atu3023	0.28	-0.3
15,737	-		Atu3023	0.31	-0.4
15,760	+		Atu3023	0.33	-0.3
15,798	+		Atu3023	0.38	-0.2
15,846	+		Atu3023	0.43	-1.1
15,871	+		Atu3023	0.46	-0.3
15,879	-		Atu3023	0.47	-0.6
15,981	-		Atu3023	0.59	+0.2
16,027	-		Atu3023	0.64	-3.0
16,086	-		Atu3023	0.70	+0.1
16,171	+		Atu3023	0.80	-0.6
16,209	-		Atu3023	0.84	-0.4
16,231	-		Atu3023	0.87	+0.0
16,291	-				-0.3
16,343	-				+0.2
16,357	-				-0.7
16,367	+				+0.6
16,414	-				+0.1
16,457	+				-0.3
16,471	+				-0.4
16,538	+				-0.4
16,544	-				-0.8
16,569	-		Atu3024	0.11	-0.2
16,603	+		Atu3024	0.13	-0.2
16,672	-		Atu3024	0.17	+0.1
16,739	-		Atu3024	0.22	-1.1
16,828	-		Atu3024	0.28	-0.1
16,841	-		Atu3024	0.28	-0.3
16,889	+		Atu3024	0.32	+1.5
16,893	-		Atu3024	0.32	+2.8
16,894	+		Atu3024	0.32	-0.2
16,899	+		Atu3024	0.32	+0.5
16,908	-		Atu3024	0.33	-1.1
16,908	-		Atu3024	0.33	-0.6
16,928	+		Atu3024	0.34	-0.0
16,928	+		Atu3024	0.34	-0.5
16,979	+		Atu3024	0.37	-0.1
16,994	+		Atu3024	0.38	-0.0
17,015	+		Atu3024	0.40	+1.4
17,211	-		Atu3024	0.53	+0.0
17,323	+		Atu3024	0.60	-0.4
17,336	+		Atu3024	0.61	+0.4
17,344	-		Atu3024	0.61	+0.2
17,344	-		Atu3024	0.61	-0.7