Experiment: Dodecyl Sulfate 0.2 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Atu1305 and Atu1306 are separated by 21 nucleotides Atu1306 and Atu1307 are separated by 57 nucleotides
Atu1305: Atu1305 - DNA processing chain A, at 1,297,167 to 1,298,309
Atu1305
Atu1306: Atu1306 - hypothetical protein, at 1,298,331 to 1,298,939
Atu1306
Atu1307: Atu1307 - dihydroorotase, at 1,298,997 to 1,300,289
Atu1307
Position (kb)
1298
1299 Strain fitness (log2 ratio)
-1
0
1
2 at 1297.343 kb on - strand, within Atu1305 at 1297.348 kb on - strand, within Atu1305 at 1297.395 kb on + strand, within Atu1305 at 1297.395 kb on + strand, within Atu1305 at 1297.440 kb on - strand, within Atu1305 at 1297.527 kb on - strand, within Atu1305 at 1297.582 kb on + strand, within Atu1305 at 1297.582 kb on + strand, within Atu1305 at 1297.720 kb on - strand, within Atu1305 at 1297.751 kb on + strand, within Atu1305 at 1297.795 kb on + strand, within Atu1305 at 1297.823 kb on + strand, within Atu1305 at 1297.831 kb on - strand, within Atu1305 at 1297.841 kb on + strand, within Atu1305 at 1297.849 kb on - strand, within Atu1305 at 1297.876 kb on - strand, within Atu1305 at 1297.906 kb on - strand, within Atu1305 at 1297.908 kb on + strand, within Atu1305 at 1297.914 kb on - strand, within Atu1305 at 1297.963 kb on - strand, within Atu1305 at 1298.136 kb on - strand, within Atu1305 at 1298.181 kb on + strand, within Atu1305 at 1298.190 kb on + strand, within Atu1305 at 1298.248 kb on + strand at 1298.306 kb on + strand at 1298.317 kb on - strand at 1298.335 kb on - strand at 1298.965 kb on - strand at 1298.970 kb on - strand at 1298.991 kb on - strand at 1299.041 kb on + strand at 1299.153 kb on - strand, within Atu1307 at 1299.163 kb on + strand, within Atu1307 at 1299.452 kb on + strand, within Atu1307 at 1299.628 kb on - strand, within Atu1307 at 1299.628 kb on - strand, within Atu1307 at 1299.891 kb on - strand, within Atu1307
Per-strain Table
Position Strand Gene LocusTag Fraction Dodecyl Sulfate 0.2 mM remove 1,297,343 - Atu1305 0.15 +1.4 1,297,348 - Atu1305 0.16 +0.7 1,297,395 + Atu1305 0.20 +0.4 1,297,395 + Atu1305 0.20 -0.5 1,297,440 - Atu1305 0.24 +0.1 1,297,527 - Atu1305 0.31 -0.6 1,297,582 + Atu1305 0.36 +0.3 1,297,582 + Atu1305 0.36 +0.1 1,297,720 - Atu1305 0.48 -0.1 1,297,751 + Atu1305 0.51 +0.1 1,297,795 + Atu1305 0.55 +0.1 1,297,823 + Atu1305 0.57 +0.1 1,297,831 - Atu1305 0.58 +0.9 1,297,841 + Atu1305 0.59 +1.4 1,297,849 - Atu1305 0.60 +0.4 1,297,876 - Atu1305 0.62 +0.4 1,297,906 - Atu1305 0.65 +0.5 1,297,908 + Atu1305 0.65 +2.6 1,297,914 - Atu1305 0.65 +0.3 1,297,963 - Atu1305 0.70 +0.3 1,298,136 - Atu1305 0.85 -0.7 1,298,181 + Atu1305 0.89 +0.2 1,298,190 + Atu1305 0.90 -0.3 1,298,248 + +0.6 1,298,306 + +0.2 1,298,317 - -0.1 1,298,335 - +1.4 1,298,965 - +0.1 1,298,970 - +0.6 1,298,991 - -0.1 1,299,041 + -0.2 1,299,153 - Atu1307 0.12 +0.3 1,299,163 + Atu1307 0.13 -0.5 1,299,452 + Atu1307 0.35 +0.5 1,299,628 - Atu1307 0.49 -0.1 1,299,628 - Atu1307 0.49 +0.6 1,299,891 - Atu1307 0.69 +0.4
Or see this region's nucleotide sequence