Experiment: p-Coumaric 1.25 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Atu3689 and Atu3690 overlap by 4 nucleotides Atu3690 and Atu3691 overlap by 8 nucleotides
Atu3689: Atu3689 - iron(III ABC transporter permease dicitrate ABC transporter permease, at 764,306 to 765,355
Atu3689
Atu3690: Atu3690 - iron (III ABC transporter permease dicitrate ABC transporter permease, at 765,352 to 766,326
Atu3690
Atu3691: Atu3691 - iron (III) dicitrate ABC transporter ATPase, at 766,319 to 767,122
Atu3691
Position (kb) 765
766
767 Strain fitness (log2 ratio) -1
0
1 at 764.378 kb on + strand at 764.448 kb on + strand, within Atu3689 at 764.449 kb on + strand, within Atu3689 at 764.462 kb on + strand, within Atu3689 at 764.464 kb on - strand, within Atu3689 at 764.470 kb on - strand, within Atu3689 at 764.564 kb on + strand, within Atu3689 at 764.834 kb on + strand, within Atu3689 at 764.837 kb on - strand, within Atu3689 at 764.866 kb on + strand, within Atu3689 at 764.960 kb on - strand, within Atu3689 at 765.000 kb on + strand, within Atu3689 at 765.008 kb on - strand, within Atu3689 at 765.050 kb on + strand, within Atu3689 at 765.099 kb on + strand, within Atu3689 at 765.107 kb on - strand, within Atu3689 at 765.107 kb on - strand, within Atu3689 at 765.290 kb on + strand at 765.298 kb on - strand at 765.414 kb on - strand at 765.419 kb on - strand at 765.419 kb on - strand at 765.577 kb on + strand, within Atu3690 at 765.785 kb on + strand, within Atu3690 at 765.785 kb on + strand, within Atu3690 at 765.785 kb on + strand, within Atu3690 at 765.785 kb on + strand, within Atu3690 at 765.785 kb on + strand, within Atu3690 at 765.793 kb on - strand, within Atu3690 at 765.893 kb on + strand, within Atu3690 at 765.898 kb on + strand, within Atu3690 at 766.010 kb on + strand, within Atu3690 at 766.023 kb on + strand, within Atu3690 at 766.104 kb on - strand, within Atu3690 at 766.596 kb on - strand, within Atu3691 at 766.618 kb on + strand, within Atu3691 at 766.618 kb on + strand, within Atu3691 at 766.626 kb on - strand, within Atu3691 at 766.638 kb on - strand, within Atu3691 at 766.687 kb on + strand, within Atu3691 at 766.687 kb on + strand, within Atu3691 at 766.689 kb on + strand, within Atu3691 at 766.718 kb on - strand, within Atu3691 at 766.731 kb on + strand, within Atu3691 at 766.902 kb on + strand, within Atu3691 at 766.931 kb on - strand, within Atu3691 at 766.971 kb on - strand, within Atu3691 at 767.001 kb on - strand, within Atu3691 at 767.058 kb on + strand at 767.086 kb on - strand at 767.097 kb on + strand at 767.115 kb on - strand at 767.115 kb on - strand at 767.116 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction p-Coumaric 1.25 mM remove 764,378 + -1.0 764,448 + Atu3689 0.14 -0.8 764,449 + Atu3689 0.14 -0.2 764,462 + Atu3689 0.15 -0.4 764,464 - Atu3689 0.15 -0.4 764,470 - Atu3689 0.16 -0.1 764,564 + Atu3689 0.25 -1.0 764,834 + Atu3689 0.50 +0.3 764,837 - Atu3689 0.51 -1.0 764,866 + Atu3689 0.53 -0.7 764,960 - Atu3689 0.62 +0.5 765,000 + Atu3689 0.66 -0.8 765,008 - Atu3689 0.67 -0.6 765,050 + Atu3689 0.71 -0.7 765,099 + Atu3689 0.76 -0.3 765,107 - Atu3689 0.76 -0.8 765,107 - Atu3689 0.76 -0.1 765,290 + -0.5 765,298 - -0.3 765,414 - +0.1 765,419 - -0.6 765,419 - -0.8 765,577 + Atu3690 0.23 -0.5 765,785 + Atu3690 0.44 -0.8 765,785 + Atu3690 0.44 -0.4 765,785 + Atu3690 0.44 -0.4 765,785 + Atu3690 0.44 -0.6 765,785 + Atu3690 0.44 -0.4 765,793 - Atu3690 0.45 -0.6 765,893 + Atu3690 0.55 -0.6 765,898 + Atu3690 0.56 -0.6 766,010 + Atu3690 0.67 -0.8 766,023 + Atu3690 0.69 -0.5 766,104 - Atu3690 0.77 -0.1 766,596 - Atu3691 0.34 -0.8 766,618 + Atu3691 0.37 -0.6 766,618 + Atu3691 0.37 -1.1 766,626 - Atu3691 0.38 -0.6 766,638 - Atu3691 0.40 -0.3 766,687 + Atu3691 0.46 -0.6 766,687 + Atu3691 0.46 -0.5 766,689 + Atu3691 0.46 -0.4 766,718 - Atu3691 0.50 -0.4 766,731 + Atu3691 0.51 -0.4 766,902 + Atu3691 0.73 -0.4 766,931 - Atu3691 0.76 +0.3 766,971 - Atu3691 0.81 -0.2 767,001 - Atu3691 0.85 -0.5 767,058 + -0.4 767,086 - +1.0 767,097 + +0.6 767,115 - +0.1 767,115 - -0.4 767,116 + +0.1
Or see this region's nucleotide sequence