Experiment: Pyrogallol 0.5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Atu0364 and Atu0365 are separated by 54 nucleotides Atu0365 and Atu0366 are separated by 110 nucleotides Atu0366 and Atu0367 are separated by 44 nucleotides
Atu0364: Atu0364 - ribokinase, at 358,549 to 359,448
Atu0364
Atu0365: Atu0365 - hypothetical protein, at 359,503 to 360,735
Atu0365
Atu0366: Atu0366 - polypeptide deformylase, at 360,846 to 361,358
Atu0366
Atu0367: Atu0367 - methionyl-tRNA formyl transferase, at 361,403 to 362,338
Atu0367
Position (kb) 359
360
361 Strain fitness (log2 ratio) -1
0
1 at 358.583 kb on + strand at 358.701 kb on - strand, within Atu0364 at 358.828 kb on - strand, within Atu0364 at 358.834 kb on + strand, within Atu0364 at 358.859 kb on + strand, within Atu0364 at 358.859 kb on + strand, within Atu0364 at 358.938 kb on + strand, within Atu0364 at 358.975 kb on - strand, within Atu0364 at 358.981 kb on + strand, within Atu0364 at 359.044 kb on - strand, within Atu0364 at 359.423 kb on - strand at 359.424 kb on - strand at 359.667 kb on - strand, within Atu0365 at 359.667 kb on - strand, within Atu0365 at 359.668 kb on + strand, within Atu0365 at 359.690 kb on + strand, within Atu0365 at 359.745 kb on - strand, within Atu0365 at 359.944 kb on + strand, within Atu0365 at 359.952 kb on - strand, within Atu0365 at 360.058 kb on - strand, within Atu0365 at 360.063 kb on + strand, within Atu0365 at 360.090 kb on - strand, within Atu0365 at 360.125 kb on - strand, within Atu0365 at 360.172 kb on - strand, within Atu0365 at 360.199 kb on + strand, within Atu0365 at 360.314 kb on + strand, within Atu0365 at 360.322 kb on - strand, within Atu0365 at 360.351 kb on + strand, within Atu0365 at 360.370 kb on + strand, within Atu0365 at 360.385 kb on + strand, within Atu0365 at 360.385 kb on + strand, within Atu0365 at 360.393 kb on - strand, within Atu0365 at 360.393 kb on - strand, within Atu0365 at 360.408 kb on - strand, within Atu0365 at 360.456 kb on + strand, within Atu0365 at 360.570 kb on + strand, within Atu0365 at 360.593 kb on - strand, within Atu0365 at 360.614 kb on + strand at 360.622 kb on - strand at 360.665 kb on + strand at 360.665 kb on + strand at 360.665 kb on + strand at 360.665 kb on + strand at 360.665 kb on + strand at 360.665 kb on + strand at 360.673 kb on - strand at 360.673 kb on - strand at 360.678 kb on - strand at 360.767 kb on + strand at 360.767 kb on + strand at 361.376 kb on + strand at 361.383 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Pyrogallol 0.5 mM remove 358,583 + +0.1 358,701 - Atu0364 0.17 -0.1 358,828 - Atu0364 0.31 +0.9 358,834 + Atu0364 0.32 +0.1 358,859 + Atu0364 0.34 -0.4 358,859 + Atu0364 0.34 -0.8 358,938 + Atu0364 0.43 -0.1 358,975 - Atu0364 0.47 +0.1 358,981 + Atu0364 0.48 -0.1 359,044 - Atu0364 0.55 -0.1 359,423 - -0.5 359,424 - -0.4 359,667 - Atu0365 0.13 +0.3 359,667 - Atu0365 0.13 +0.8 359,668 + Atu0365 0.13 +0.3 359,690 + Atu0365 0.15 +0.5 359,745 - Atu0365 0.20 +1.0 359,944 + Atu0365 0.36 +0.9 359,952 - Atu0365 0.36 -0.0 360,058 - Atu0365 0.45 +0.3 360,063 + Atu0365 0.45 +0.2 360,090 - Atu0365 0.48 -0.1 360,125 - Atu0365 0.50 +0.2 360,172 - Atu0365 0.54 +0.6 360,199 + Atu0365 0.56 +1.0 360,314 + Atu0365 0.66 +0.4 360,322 - Atu0365 0.66 +0.8 360,351 + Atu0365 0.69 +0.7 360,370 + Atu0365 0.70 -1.4 360,385 + Atu0365 0.72 +0.3 360,385 + Atu0365 0.72 +0.5 360,393 - Atu0365 0.72 +0.3 360,393 - Atu0365 0.72 -0.0 360,408 - Atu0365 0.73 -1.1 360,456 + Atu0365 0.77 +0.0 360,570 + Atu0365 0.87 +0.3 360,593 - Atu0365 0.88 +0.3 360,614 + +0.2 360,622 - +1.0 360,665 + +0.3 360,665 + +1.0 360,665 + +0.5 360,665 + -0.3 360,665 + +0.4 360,665 + +0.2 360,673 - +0.3 360,673 - +0.9 360,678 - -1.3 360,767 + -0.1 360,767 + -1.1 361,376 + +0.2 361,383 + +0.0
Or see this region's nucleotide sequence