Strain Fitness in Agrobacterium fabrum C58 around Atu4890

Experiment: Acetosyringone 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Acetosyringone 5 mM
2,065,637	+		Atu4888	0.69	-0.4
2,065,669	+		Atu4888	0.80	-0.5
2,065,760	-				+0.7
2,065,762	+				-0.8
2,065,787	+				-0.3
2,065,808	+				-1.8
2,065,816	-				+1.4
2,065,826	+				+0.5
2,065,899	-		Atu4889	0.13	+1.1
2,065,944	+		Atu4889	0.18	-0.8
2,065,977	-		Atu4889	0.22	-0.6
2,065,994	+		Atu4889	0.25	+0.3
2,066,015	+		Atu4889	0.27	-1.1
2,066,071	-		Atu4889	0.34	-0.0
2,066,224	+		Atu4889	0.53	-0.3
2,066,463	-		Atu4889	0.83	-0.5
2,066,504	+		Atu4889	0.88	-0.1
2,066,513	+		Atu4889	0.89	+0.2
2,066,559	-				-0.5
2,066,613	-				-0.5
2,067,147	+		Atu4890	0.67	-0.7
2,067,924	+				-0.8
2,067,976	+				-0.6
2,067,984	-				+0.7
2,067,996	+				+0.0
2,067,996	+				+0.2
2,067,996	-				+0.6
2,068,133	+				-0.0
2,068,141	-				-0.5
2,068,205	+				-0.4
2,068,213	-				+1.7
2,068,218	-				+0.5
2,068,221	+				-0.2
2,068,222	-				+0.3
2,068,291	-		Atu4892	0.10	-0.8
2,068,312	+		Atu4892	0.11	-0.1
2,068,393	-		Atu4892	0.15	-0.5