Strain Fitness in Agrobacterium fabrum C58 around Atu4806

Experiment: Acetosyringone 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Acetosyringone 5 mM
1,982,450	+		Atu4805	0.60	-0.1
1,982,462	-		Atu4805	0.61	-0.5
1,982,516	+		Atu4805	0.63	-0.2
1,982,519	-		Atu4805	0.63	-0.5
1,982,603	+		Atu4805	0.67	-0.4
1,982,653	-		Atu4805	0.69	+0.5
1,982,662	+		Atu4805	0.69	+0.2
1,982,662	+		Atu4805	0.69	+0.5
1,982,680	-		Atu4805	0.70	+0.3
1,982,713	-		Atu4805	0.71	-0.2
1,982,789	-		Atu4805	0.74	-0.0
1,982,876	+		Atu4805	0.78	+0.1
1,982,884	-		Atu4805	0.78	-0.2
1,982,884	-		Atu4805	0.78	-0.1
1,982,920	-		Atu4805	0.80	+0.2
1,982,938	+		Atu4805	0.81	-0.2
1,982,988	+		Atu4805	0.83	-0.5
1,982,996	-		Atu4805	0.83	+0.3
1,982,996	-		Atu4805	0.83	-1.0
1,983,053	-		Atu4805	0.85	+0.7
1,983,191	+				-0.0
1,983,198	-				-0.3
1,983,199	-				+0.2
1,983,232	+				+0.5
1,983,253	+				-0.1
1,983,258	+				+0.7
1,983,266	-				+0.0
1,983,306	-				+0.3
1,983,336	+				+0.6
1,983,344	-				-0.3
1,983,382	-				-0.2
1,983,384	+				-0.1
1,983,399	+				+0.2
1,983,534	-		Atu4806	0.10	-0.6
1,983,545	+		Atu4806	0.11	+0.2
1,983,563	+		Atu4806	0.13	-2.0
1,983,563	+		Atu4806	0.13	-0.5
1,983,563	+		Atu4806	0.13	-0.9
1,983,568	+		Atu4806	0.14	-0.5
1,983,571	-		Atu4806	0.14	-1.1
1,983,574	+		Atu4806	0.14	-0.2
1,983,634	+		Atu4806	0.20	+0.2
1,983,634	+		Atu4806	0.20	-1.4
1,983,634	+		Atu4806	0.20	+0.2
1,983,642	-		Atu4806	0.21	-0.5
1,983,645	+		Atu4806	0.22	-0.1
1,983,646	+		Atu4806	0.22	+1.0
1,983,749	+		Atu4806	0.32	-0.5
1,983,757	+		Atu4806	0.33	+0.1
1,983,792	-		Atu4806	0.37	-0.6
1,983,828	+		Atu4806	0.41	+0.7
1,983,849	+		Atu4806	0.43	-0.2
1,983,849	+		Atu4806	0.43	-0.1
1,983,852	-		Atu4806	0.43	-0.2
1,983,912	+		Atu4806	0.49	-0.3
1,983,920	-		Atu4806	0.50	-0.4
1,983,950	-		Atu4806	0.53	-0.3
1,983,950	-		Atu4806	0.53	-0.8
1,984,009	-		Atu4806	0.59	+0.1
1,984,052	-		Atu4806	0.64	+0.3
1,984,082	-		Atu4806	0.67	-0.1
1,984,161	+		Atu4806	0.75	+0.2
1,984,267	-		Atu4806	0.86	+0.3
1,984,314	+				-0.4
1,984,327	-				-0.3
1,984,349	-				-0.5
1,984,400	-				+0.2
1,984,623	-		Atu4807	0.15	-0.6
1,984,695	+		Atu4807	0.20	+0.2
1,984,723	+		Atu4807	0.22	-0.8
1,984,811	-		Atu4807	0.28	+0.2
1,985,007	+		Atu4807	0.41	-0.1
1,985,018	-		Atu4807	0.41	+0.1
1,985,043	+		Atu4807	0.43	+0.2
1,985,062	+		Atu4807	0.44	+0.6
1,985,095	+		Atu4807	0.46	+0.6
1,985,240	+		Atu4807	0.56	+1.3
1,985,330	+		Atu4807	0.62	-0.2
1,985,341	+		Atu4807	0.63	-0.6
1,985,349	-		Atu4807	0.63	-0.1
1,985,349	-		Atu4807	0.63	+0.2
1,985,349	-		Atu4807	0.63	+0.1