Strain Fitness in Agrobacterium fabrum C58 around Atu4486

Experiment: Acetosyringone 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Acetosyringone 5 mM
1,631,311	+		Atu4485	0.51	+0.2
1,631,452	-		Atu4485	0.61	-0.1
1,631,578	+		Atu4485	0.71	-0.7
1,631,602	+		Atu4485	0.72	+0.1
1,631,607	+		Atu4485	0.73	+0.8
1,631,629	+		Atu4485	0.74	-0.3
1,631,699	-		Atu4485	0.79	+0.6
1,631,702	-		Atu4485	0.80	-0.6
1,631,790	+		Atu4485	0.86	-0.4
1,631,876	+				-0.8
1,631,946	-				-0.5
1,631,970	-				+0.4
1,632,008	-				+0.3
1,632,009	-				+0.0
1,632,195	+				-1.3
1,632,201	+				+0.4
1,632,233	+				+0.3
1,632,344	+		Atu4486	0.11	-0.1
1,632,430	+		Atu4486	0.24	+0.6
1,632,438	-		Atu4486	0.26	+0.7
1,632,438	-		Atu4486	0.26	-0.0
1,632,506	-		Atu4486	0.37	+0.4
1,632,633	-		Atu4486	0.57	+0.3
1,632,683	-		Atu4486	0.65	-2.2
1,632,691	+		Atu4486	0.66	+0.5
1,633,112	-				+0.3
1,633,147	-				-0.1
1,633,214	+				+1.5
1,633,351	+				-0.7
1,633,351	+				-0.7
1,633,359	-				+0.6
1,633,582	-		Atu4487	0.30	+0.3
1,633,710	+		Atu4487	0.42	+0.4