Strain Fitness in Agrobacterium fabrum C58 around Atu4470

Experiment: Acetosyringone 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Acetosyringone 5 mM
1,610,588	+		Atu4468	0.82	-0.2
1,610,792	+				-0.2
1,610,931	+		Atu4469	0.22	-0.2
1,611,119	-		Atu4469	0.44	-1.4
1,611,203	+		Atu4469	0.54	-0.5
1,611,392	+		Atu4469	0.75	-0.7
1,611,431	-		Atu4469	0.80	-0.3
1,611,723	+		Atu4470	0.16	-1.7
1,611,827	+		Atu4470	0.27	+0.1
1,611,917	+		Atu4470	0.37	-0.6
1,611,917	+		Atu4470	0.37	-0.6
1,611,917	+		Atu4470	0.37	-0.5
1,611,925	-		Atu4470	0.38	-0.3
1,611,925	-		Atu4470	0.38	+0.2
1,611,988	+		Atu4470	0.45	-1.5
1,612,012	-		Atu4470	0.48	-0.3
1,612,051	-		Atu4470	0.52	-0.3
1,612,111	-		Atu4470	0.58	-1.2
1,612,497	-				-0.6
1,612,535	+				-0.8
1,612,545	+				-0.6
1,612,868	-		Atu4471	0.42	+0.3
1,612,873	+		Atu4471	0.43	-1.6
1,612,873	+		Atu4471	0.43	+0.1
1,612,873	+		Atu4471	0.43	-0.8
1,612,891	-		Atu4471	0.45	-0.5
1,612,896	-		Atu4471	0.45	-0.3
1,612,911	+		Atu4471	0.47	+0.4
1,612,917	-		Atu4471	0.48	-0.4
1,612,920	+		Atu4471	0.48	-0.1
1,612,928	-		Atu4471	0.49	-0.1
1,613,011	+		Atu4471	0.58	-1.4
1,613,054	-		Atu4471	0.63	-0.7
1,613,056	-		Atu4471	0.63	-0.1
1,613,188	-		Atu4471	0.78	-0.6
1,613,284	-		Atu4471	0.88	-0.8
1,613,292	-		Atu4471	0.89	-1.0
1,613,346	+				-2.7