Strain Fitness in Agrobacterium fabrum C58 around Atu4176

Experiment: Acetosyringone 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Acetosyringone 5 mM
1,297,667	+				+0.2
1,297,678	+				+1.1
1,298,197	+		Atu4176	0.51	+0.4
1,298,210	-		Atu4176	0.53	-0.1
1,298,227	+		Atu4176	0.55	+2.0
1,298,232	+		Atu4176	0.56	+0.4
1,298,250	-		Atu4176	0.58	+0.1
1,298,262	+		Atu4176	0.60	+0.4
1,298,419	-		Atu4176	0.80	-1.1
1,298,658	-				+0.4
1,298,708	-				+0.1
1,298,742	+				+0.0
1,298,750	-				-0.2
1,298,750	-				-1.8
1,298,819	-				-0.6
1,298,851	-				-0.4
1,298,888	-				+0.5
1,298,888	-				+0.0
1,298,893	+				-0.4
1,298,902	-				+0.3
1,298,902	-				+0.2
1,298,998	+				+0.6
1,298,999	-				+1.0
1,299,006	-				+1.0
1,299,034	-				-0.8
1,299,071	+				-0.3
1,299,281	-		Atu4177	0.13	-0.1
1,299,467	+		Atu4177	0.20	+0.1
1,299,467	+		Atu4177	0.20	-0.7
1,299,516	+		Atu4177	0.22	-0.6