Strain Fitness in Agrobacterium fabrum C58 around Atu4029

Experiment: Acetosyringone 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Acetosyringone 5 mM
1,142,452	+		Atu4027	0.33	-0.4
1,142,642	-		Atu4027	0.71	+0.1
1,142,647	-		Atu4027	0.72	-0.6
1,142,647	-		Atu4027	0.72	-0.4
1,142,647	-		Atu4027	0.72	-0.8
1,142,787	+				+0.1
1,142,795	-				-0.1
1,143,032	+		Atu4028	0.48	+0.1
1,143,035	-		Atu4028	0.48	+0.8
1,143,057	+		Atu4028	0.53	+0.1
1,143,165	+		Atu4028	0.74	+0.2
1,143,173	-		Atu4028	0.75	-0.2
1,143,173	-		Atu4028	0.75	+0.1
1,143,178	-		Atu4028	0.76	+1.7
1,143,254	+				-0.2
1,143,256	+				-0.5
1,143,330	-				+0.4
1,143,413	-				+0.6
1,143,414	+				-0.5
1,143,576	-		Atu4029	0.14	-0.4
1,143,713	+		Atu4029	0.29	+1.1
1,143,713	+		Atu4029	0.29	-0.1
1,143,713	+		Atu4029	0.29	+0.0
1,143,721	-		Atu4029	0.29	+0.7
1,143,864	-		Atu4029	0.45	+0.9
1,143,901	-		Atu4029	0.49	+0.7
1,144,033	-		Atu4029	0.63	+0.3
1,144,094	+		Atu4029	0.70	+0.8
1,144,233	+		Atu4029	0.85	+0.2
1,144,475	-				+0.8
1,144,519	-		Atu4030	0.12	+0.2
1,144,546	-		Atu4030	0.15	+0.7
1,144,548	-		Atu4030	0.15	+0.3
1,144,639	-		Atu4030	0.25	+0.2
1,144,712	-		Atu4030	0.32	+0.1
1,144,807	+		Atu4030	0.42	+0.5
1,144,834	+		Atu4030	0.45	+1.4
1,144,992	-		Atu4030	0.62	+2.8
1,145,011	-		Atu4030	0.64	+0.5
1,145,013	+		Atu4030	0.64	+0.0
1,145,013	+		Atu4030	0.64	+0.7
1,145,013	+		Atu4030	0.64	+0.3
1,145,073	+		Atu4030	0.70	+0.4
1,145,221	+		Atu4030	0.86	-0.2
1,145,249	-		Atu4030	0.89	+0.2
1,145,287	+				+0.4
1,145,309	+				-0.3
1,145,314	+				+0.5