Strain Fitness in Agrobacterium fabrum C58 around Atu3763
Experiment: Acetosyringone 5 mM
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Acetosyringone 5 mM |
---|---|---|---|---|---|
remove | |||||
841,765 | - | Atu3762 | 0.36 | -1.3 | |
842,914 | - | -0.7 | |||
843,045 | + | Atu3763 | 0.16 | +0.7 | |
843,082 | + | Atu3763 | 0.18 | -0.5 | |
843,248 | + | Atu3763 | 0.28 | -2.0 | |
843,985 | - | Atu3763 | 0.69 | -0.8 | |
844,730 | + | -0.1 | |||
844,825 | - | +0.3 | |||
844,857 | + | +0.0 | |||
844,938 | - | -0.4 | |||
844,985 | + | -0.4 | |||
845,095 | - | Atu3764 | 0.16 | -0.9 | |
845,100 | + | Atu3764 | 0.17 | -0.1 | |
845,185 | - | Atu3764 | 0.22 | +0.1 | |
845,240 | + | Atu3764 | 0.26 | +0.8 | |
845,248 | - | Atu3764 | 0.26 | -0.5 | |
845,250 | - | Atu3764 | 0.26 | -1.1 | |
845,258 | + | Atu3764 | 0.27 | -0.6 | |
845,356 | + | Atu3764 | 0.33 | +0.6 | |
845,356 | + | Atu3764 | 0.33 | +0.4 | |
845,364 | - | Atu3764 | 0.34 | +0.1 | |
845,436 | - | Atu3764 | 0.39 | -1.0 | |
845,508 | - | Atu3764 | 0.43 | +0.4 | |
845,508 | - | Atu3764 | 0.43 | +0.3 | |
845,508 | - | Atu3764 | 0.43 | +1.5 |
Or see this region's nucleotide sequence