Strain Fitness in Agrobacterium fabrum C58 around Atu3012

Experiment: Acetosyringone 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Acetosyringone 5 mM
7,111	-		Atu3010	0.55	-1.8
7,111	-		Atu3010	0.55	+0.1
7,111	-		Atu3010	0.55	+0.1
7,185	-		Atu3010	0.63	-0.1
7,194	+		Atu3010	0.64	-0.3
7,202	-		Atu3010	0.65	+0.6
7,311	+		Atu3010	0.77	+1.2
7,357	+		Atu3010	0.81	+0.8
7,364	+		Atu3010	0.82	+1.2
7,365	+		Atu3010	0.82	-0.4
7,366	-		Atu3010	0.82	+0.0
7,383	-		Atu3010	0.84	-1.0
7,403	+		Atu3010	0.86	-1.3
7,403	+		Atu3010	0.86	-0.7
7,411	-		Atu3010	0.87	-0.2
7,411	-		Atu3010	0.87	+0.3
7,411	-		Atu3010	0.87	-0.4
7,429	-		Atu3010	0.89	+0.6
7,515	+				+1.6
7,588	-		Atu3011	0.18	-0.9
7,678	-		Atu3011	0.43	-0.9
7,678	-		Atu3011	0.43	-1.4
7,758	-		Atu3011	0.66	+0.6
7,760	-		Atu3011	0.66	+0.6
7,945	-				-0.9
7,969	-				-0.4
7,993	+				-0.1
7,993	+				-0.6
8,001	-				+1.2
8,001	-				-0.3
8,001	-				-0.4
8,046	-				-0.1
8,046	-				+0.0
8,055	+				-0.3
8,069	+				-0.6
8,077	-				+0.3
8,161	+				-0.8
8,251	-		Atu3012	0.23	-2.4
8,268	+		Atu3012	0.25	-0.7
8,465	-		Atu3012	0.54	-1.5
8,682	+		Atu3012	0.85	-0.2
8,730	+				-0.9
8,769	-				-0.5
9,018	+		Atu3013	0.19	-1.1
9,102	+		Atu3013	0.40	-0.2
9,125	-		Atu3013	0.46	+0.3
9,147	+		Atu3013	0.51	-0.4
9,195	+		Atu3013	0.63	-0.3
9,258	-		Atu3013	0.79	-0.5
9,331	-				-0.4
9,363	+				-0.2
9,457	-		Atu3014	0.44	+0.2
9,509	-		Atu3014	0.64	-0.7
9,695	-				-1.2
9,732	+				-1.8
9,768	-				+0.8