Strain Fitness in Agrobacterium fabrum C58 around Atu3001

Experiment: Acetosyringone 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Acetosyringone 5 mM
395	+				+0.6
638	+				+0.1
646	+				+1.1
1,050	+		Atu3001	0.15	+1.1
1,058	-		Atu3001	0.16	-1.2
1,109	-		Atu3001	0.23	-1.2
1,352	+		Atu3001	0.57	+0.4
1,436	+		Atu3001	0.69	+0.1
1,436	+		Atu3001	0.69	-0.4
1,738	+				-0.7
1,746	-				-1.4
1,746	-				-0.7
1,861	-				+1.1
1,935	-				+1.6
1,957	-				+1.6
2,273	-				+2.6
2,368	-				-0.4
2,550	+				+0.9
2,577	+				+1.6