Strain Fitness in Agrobacterium fabrum C58 around Atu2814

Experiment: Acetosyringone 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Acetosyringone 5 mM
2,816,219	-		Atu2813	0.17	+0.2
2,816,233	+		Atu2813	0.18	-0.3
2,816,243	+		Atu2813	0.19	+0.4
2,816,246	-		Atu2813	0.19	-1.8
2,816,319	-		Atu2813	0.25	-0.1
2,816,357	-		Atu2813	0.29	-0.0
2,816,371	+		Atu2813	0.30	-0.1
2,816,371	+		Atu2813	0.30	-0.2
2,816,455	+		Atu2813	0.37	-0.1
2,816,473	-		Atu2813	0.39	-0.4
2,816,473	-		Atu2813	0.39	-0.8
2,816,498	+		Atu2813	0.41	+0.1
2,816,500	+		Atu2813	0.41	-0.5
2,816,563	-		Atu2813	0.47	-0.2
2,816,577	+		Atu2813	0.48	-0.6
2,816,717	+		Atu2813	0.60	-0.3
2,816,726	+		Atu2813	0.61	-0.2
2,816,748	-		Atu2813	0.63	+0.4
2,816,824	-		Atu2813	0.70	-0.4
2,816,850	+		Atu2813	0.72	-0.8
2,816,902	+		Atu2813	0.77	+0.6
2,816,944	+		Atu2813	0.81	-0.4
2,816,954	-		Atu2813	0.81	-0.1
2,816,980	+		Atu2813	0.84	-0.1
2,816,988	-		Atu2813	0.84	-0.4
2,816,995	-		Atu2813	0.85	-0.3
2,817,060	+				-0.5
2,817,160	-				+0.2
2,817,174	+				-0.4
2,817,241	+				+0.0
2,817,417	+		Atu2814	0.25	-0.1
2,817,421	+		Atu2814	0.26	-0.4
2,817,561	+		Atu2814	0.40	-1.6
2,817,778	+		Atu2814	0.61	-0.3
2,817,876	+		Atu2814	0.71	-0.0
2,817,876	+		Atu2814	0.71	+0.2
2,817,930	-		Atu2814	0.76	-0.1
2,817,979	-		Atu2814	0.81	+0.4
2,818,046	+		Atu2814	0.88	+2.3
2,818,080	+				+1.0
2,818,269	-		Atu2815	0.11	-1.1
2,818,279	-		Atu2815	0.13	-0.2
2,818,292	+		Atu2815	0.14	+0.3
2,818,359	+		Atu2815	0.22	+0.4
2,818,367	-		Atu2815	0.23	-0.1
2,818,529	+		Atu2815	0.43	-0.6
2,818,536	-		Atu2815	0.44	-0.2
2,818,605	+		Atu2815	0.52	-0.3
2,818,613	-		Atu2815	0.53	-0.5
2,818,700	-		Atu2815	0.64	+0.0
2,818,702	-		Atu2815	0.64	+0.9
2,818,702	-		Atu2815	0.64	+0.4
2,818,748	+		Atu2815	0.70	-0.3
2,818,756	-		Atu2815	0.71	-1.5
2,818,816	-		Atu2815	0.78	+1.0
2,818,948	-				-0.3
2,818,991	-				-0.6
2,818,999	+				-0.9
2,819,021	+				+0.2
2,819,042	+				-0.7
2,819,050	-				+0.2
2,819,050	-				-0.6
2,819,050	-				-0.7
2,819,062	+				-1.4
2,819,065	-				-0.2
2,819,077	+				-0.2
2,819,102	-				+0.2
2,819,134	+		Atu2816	0.13	+0.2
2,819,143	+		Atu2816	0.14	-0.9
2,819,151	-		Atu2816	0.15	-0.4
2,819,162	-		Atu2816	0.16	+0.9