Strain Fitness in Agrobacterium fabrum C58 around Atu2591

Experiment: Acetosyringone 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Acetosyringone 5 mM
2,567,705	+		Atu2590	0.34	-1.2
2,567,713	-		Atu2590	0.34	-0.3
2,567,713	-		Atu2590	0.34	-1.9
2,567,740	-		Atu2590	0.36	-0.9
2,567,866	+		Atu2590	0.47	-1.1
2,567,916	+		Atu2590	0.51	-1.1
2,568,019	-		Atu2590	0.60	-1.1
2,568,180	-		Atu2590	0.73	-1.4
2,568,259	+		Atu2590	0.79	-2.1
2,568,304	-		Atu2590	0.83	-0.4
2,568,356	+		Atu2590	0.87	-1.4
2,568,384	-		Atu2590	0.90	-2.0
2,568,384	-		Atu2590	0.90	-1.7
2,568,415	-				-0.2
2,568,474	-				-0.4
2,568,542	-				-0.4
2,568,588	-				-1.1
2,568,702	-				-1.4
2,568,727	+				-0.7
2,568,894	-		Atu2591	0.20	-0.9
2,568,976	-		Atu2591	0.27	-0.7
2,568,979	+		Atu2591	0.27	-2.3
2,568,987	-		Atu2591	0.28	-0.7
2,568,989	+		Atu2591	0.28	-1.4
2,569,014	+		Atu2591	0.30	-2.5
2,569,041	+		Atu2591	0.33	-1.4
2,569,087	-		Atu2591	0.37	-1.1
2,569,161	+		Atu2591	0.43	-0.5
2,569,194	-		Atu2591	0.46	-0.1
2,569,209	+		Atu2591	0.48	-1.1
2,569,217	-		Atu2591	0.48	-1.5
2,569,305	+		Atu2591	0.56	-1.7
2,569,360	-		Atu2591	0.61	-0.2
2,569,467	+		Atu2591	0.71	+0.6
2,569,528	+		Atu2591	0.76	-0.2
2,569,531	-		Atu2591	0.76	-0.8
2,569,555	-		Atu2591	0.78	-2.4
2,569,555	-		Atu2591	0.78	-0.7
2,569,768	+				+0.5
2,569,768	+				-0.3
2,569,768	+				+0.5
2,569,768	+				+0.3
2,569,776	-				-0.8
2,569,845	+				-1.8
2,569,999	-		Atu2592	0.18	-1.8
2,570,027	+		Atu2592	0.20	-0.4
2,570,069	-		Atu2592	0.24	+0.6
2,570,203	-		Atu2592	0.35	-1.6
2,570,238	+		Atu2592	0.38	-1.2
2,570,266	-		Atu2592	0.41	-2.2
2,570,269	+		Atu2592	0.41	+1.2
2,570,270	+		Atu2592	0.41	-2.4
2,570,273	+		Atu2592	0.41	-0.7
2,570,341	-		Atu2592	0.47	+0.2
2,570,388	-		Atu2592	0.51	-0.4
2,570,481	-		Atu2592	0.60	-0.3
2,570,486	-		Atu2592	0.60	+0.6
2,570,489	+		Atu2592	0.60	-1.0
2,570,693	-		Atu2592	0.78	-0.7