Strain Fitness in Agrobacterium fabrum C58 around Atu2258
Experiment: Acetosyringone 5 mM
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Acetosyringone 5 mM |
---|---|---|---|---|---|
remove | |||||
2,231,235 | - | +0.2 | |||
2,231,407 | - | Atu2258 | 0.41 | +0.2 | |
2,231,481 | + | Atu2258 | 0.58 | +0.6 | |
2,231,589 | + | Atu2258 | 0.85 | -1.5 | |
2,231,615 | - | +0.3 | |||
2,231,668 | - | -0.9 | |||
2,231,782 | - | -0.3 | |||
2,231,900 | + | Atu2259 | 0.18 | +0.1 | |
2,231,976 | + | Atu2259 | 0.24 | +0.1 | |
2,232,337 | - | Atu2259 | 0.51 | +0.0 |
Or see this region's nucleotide sequence